Hibiscus syriacus (Rose-of-Sharon): 120198301
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Entry
120198301 CDS
T09559
Name
(RefSeq) nuclear-pore anchor-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120198301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120198301
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120198301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
PUMA_CC
Laa1_Sip1_HTR5
Motif
Other DBs
NCBI-GeneID:
120198301
NCBI-ProteinID:
XP_039055567
LinkDB
All DBs
Position
Unknown
AA seq
2076 aa
AA seq
DB search
MPLFISLDELSLLSDDGAAVAERADAFIRELNRELETAKAKADAAVITAEQNCSLLEQKF
LSISGELSDLQSQNAQLQSSRDVKLAELAQVQAEKHQLHLQSIGKDGEIERLTTEVSELH
KSKRQLLEMIEQKDSEIADKNATIKAYLDKIVNLTDNASQKESRLSETEAELVRVQTTCT
RLSQEKELIERHNTWLNEELTTKVDNLIEIRRTHAELDADMSAKLADVEKQYNECSSSLN
WYKERTKELETKLTSLQEELCSSKEVATSNEERFSSELSIANKLVDLYKESSGEWSKKAG
ELEGAIKALEMHLGQVQDEYKDRLEKEASAKKQVEKEMVDLKEELEKCKAEIEAGRKENE
LNLLPFGTFTTKTWINSNEANDLVEDNHALVPKIPAGVSGTALAAFLLRDGWSLAKMYAK
YQEAVDALRHEQLGRKESESILQRVLREIEEKAVVIMDERAEHERMLEAYTLINQKLQNF
TSERSNLEKTIQELKADLRRRERDNSLAQKEIADLQRQVTVLLKECRDIQLRCGPVGHDF
PGDDATVASSDMRLQPNADKVISELTFKDINGLVEQNAQLRSLVRDLSDQIESKEMEFKE
KLELELKKQADEAASKVAAVLQRAEEQGCMIESLHTSVAMYKKLYEEEHKLHHSYFPAAE
AAPDTGRRDLLLLLEGSQEASKKAQEKATERLRCLEEDLAKARGEIICLRSERDKLALEA
NFAKEKLESVMKEAAHERDKINGVLARNVEFSQLIINYQKKLRESSESLNVAEECSRKLT
MEVSILKQEKEMLANAEKRACDEVRSLSERVYRLQASLDTIQSAEEVREKTRVLERRKQE
EYVKQIEKEWAEAKKQVQEERDNVRTLISDREQTLKNAMKQVEDMGKELANALHACASAE
VRAAVSEAKLADMEKKLKSSESLTIDGGTPSTISTDAVADLPMTKEEMQKLKEEAKANRG
HMLQYKNIAQANEDALKQIELAHENFKIEAEKLKKSLEAELVSLRQRVSELENESSLKSE
EVASATAGKEEVLSSALAEITSLNEETAAKSSQIMALETQISSIKENLDNEHEKWRAAQA
NYERQVILQSETIQELTKTSQELALLKEEASELRKVADVHRSENTELKAKWEMEKSILEE
SRKEAEKKYDELNEQNKILHSRIEAMHIQLAEKDRGSIPDSHGDYGLQNVINYLRRTKEI
AETEISLLKQEKLRLQSQLENALKAEANAKATLNAERSNSRAVLMTEDEIKSLQHQIREM
NLLRESNMQLREENKHNFEECQKLREVAHKSKIESEALESRLMEKQFELETCKREFEKHQ
AEREILEKRVSELLERCRNIDVEEYDRLKNDVQQNEEKLKEKDAQIEEITNLLSKKQDII
SKLEQDLAISKSELNEKDKKLNDILQFEANLKSDMEKQKKLVLQFKRRAENFAKEKDQMS
KENQALSKLVEELKQVGRKPGSDITGDQVMKEKEEKDTRIQILEKTVERQREELKKEKDE
HQNEKTKRIKCERTIMEAVRKSEKGKATVLGELEKYQLALKRISEELEKLKHAEGNLPQG
TSVVQLLSGTISDDHASPYLSAAEDFERVARSILNELGTGASSGDVPSVDSSAAVLTGTT
VPDHGPVTTSSTLPVTSQHQLAKAFEERRSIVPKTNIETRKTGRKLVRPRFVKAEERKGD
VEMSEATSHDVDAQGTQQSARKRQASATTELSEDLPVPGETSVDVVAPVLKKSKGPDSGQ
EAAEGQAAAHSENLGAPQVTEEPDETVGDITLGSNEEVVDVEKEEADTMEENLEESKEPQ
VDGTSEAGLQENKNLSDEVLDKPSGNEMITDEEPKNLAVQESQQPMLEIESEKEEGELDP
GVAADTEGGTDVHNVVGSSEVGGTELVSSPLASPSRVEDESLVTAAECDNSPDAVTYDKN
DEGDIGEETISEGFEKSNDGNEQSAGETDPTPEAATAAVVTSGTNESGATSGPPEGEVSK
NTGSSSGTAAAEAEDVKQTSPISGSGSATSGASTLVNLQERARERAMLRQAGVVGSSTTS
SRGRGRVAVRGRGGTRGRSVRGGRVGGAGTQNPDQQ
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgccccttttcatttccctcgatgaactgtcgctgctctccgacgatggcgccgcggtg
gcggagagggccgatgccttcattagggagctaaaccgagagctggagacggcgaaggcc
aaggctgatgccgccgtcatcactgccgagcaaaactgctctcttctcgagcagaagttc
ctctccatctccggtgagttgtcggacctccagtctcagaacgcacaacttcaatcatct
cgggatgtcaaactcgccgagctagcccaggttcaagccgagaagcatcagctccacctc
caatccattggaaaagatggagagattgagaggttaacaacggaggtgtcggagctacat
aagtcgaagaggcagttgctggagatgatcgagcagaaagattcggagattgctgacaag
aacgctactattaaggcctatctcgataagattgttaacttgaccgacaatgcttcccaa
aaggagtctcgattaagtgaaactgaggctgagttggttagagtacagactacttgcaca
cgtctttctcaggaaaaggagcttattgagaggcacaatacatggcttaacgaggagtta
actaccaaagtcgacaatcttattgagattcgtagaacacatgctgaacttgatgccgat
atgtctgctaagcttgctgatgttgaaaagcaatacaatgaatgctccagctccctaaat
tggtacaaggaaagaacaaaggaactagaaactaagctgacatctctacaggaggaattg
tgttcatcaaaagaggttgccacatccaatgaggaaagattctcttctgaactatcaatt
gcaaataagctagttgacttatataaagaaagttcaggggaatggtccaaaaaggctggg
gagctcgagggagccataaaagctttagaaatgcaccttggccaagttcaagatgaatac
aaagatagacttgagaaggaagcatctgcaaagaaacaggttgaaaaggagatggttgat
ctgaaagaggaacttgagaagtgcaaagctgaaattgaagctggtaggaaagagaatgag
ttgaatctgcttccatttggcacttttacaacaaaaacatggattaattcaaatgaggct
aatgacttggttgaggataatcatgcacttgtcccaaagatcccggctggggtttctgga
acggcattagctgcttttcttctccgtgatggctggagtctggccaaaatgtacgcaaaa
tatcaagaggccgttgatgctcttcgacatgagcaattgggaagaaaggaatctgaatcc
atattgcaaagggtgctacgtgaaatagaagagaaagcagttgtcattatggatgaaaga
gcggaacatgaaagaatgcttgaggcatatactttaatcaaccagaaattgcagaatttt
acatcagaacgctcaaatctagagaaaacaatacaggaactaaaggctgatttgaggagg
cgtgaaagagacaattccctggctcaaaaggagattgctgatcttcaaaggcaggtgaca
gttcttcttaaggaatgtcgtgacatacaactacgatgtggacctgttggacatgatttt
cctggtgatgatgcaactgttgcttcttctgatatgagactgcagcccaatgctgacaaa
gttatatcagaattgacattcaaggatataaatgggttagtcgagcagaatgcccaactt
aggagccttgtccgcgatctttctgaccagatagaaagtaaagagatggagttcaaggaa
aaactggaattggagctcaaaaaacaagctgatgaagctgcatctaaagttgcagcagtg
ttgcagagagctgaagagcaggggtgcatgattgaatcactgcatacttctgttgcaatg
tacaagaagctatatgaggaggaacataagcttcatcattcttatttccctgctgcagaa
gcagctccagatactggaaggagggatctcttgcttcttcttgaaggttctcaggaagct
agtaagaaagctcaagagaaagctactgaacgtttaagatgccttgaagaggatctagct
aaggccaggggtgagattatatgtttacggtcagagcgtgacaagttggctcttgaagca
aattttgcaaaagaaaaacttgaaagcgtcatgaaagaagctgcgcatgagagggataaa
atcaatggtgttctggcaagaaatgtggagttctcacaattgattattaactaccaaaag
aagctacgcgaaagttctgaatctttaaatgttgctgaggagtgttctcggaaattgaca
atggaggtatctatattgaaacaagaaaaagagatgttagcaaatgccgaaaagagagca
tgtgatgaagttcgcagcttgtcagagagagtttatcgtctgcaggctagtttggacact
atacagagtgcagaggaagttcgtgagaaaacgagagttttggagagaagaaagcaagag
gagtatgttaaacaaatagagaaagaatgggctgaagctaagaaacaggtacaagaagag
agggataacgttcgtactctcatatctgaccgtgagcagactctgaaaaatgccatgaaa
caagttgaagatatgggaaaagaattggctaatgctttgcatgcttgtgcctctgcggag
gtgagggcggccgtttctgaggccaaacttgctgatatggagaaaaagcttaaatcttct
gagagtttgacaatagatggtggtacaccatccactatttcaacagatgcggtggcagac
ttgccaatgacaaaagaagagatgcagaaactaaaggaggaggcaaaagctaacaggggt
cacatgttgcagtataagaacatagcacaagccaatgaagatgcgttgaagcaaattgaa
ctggcacatgaaaattttaagattgaggctgaaaagttgaagaaatctttagaagcagag
cttgtttcacttagacagagggtttctgaacttgagaatgaatcttctttgaaatcagag
gaagtagcctctgcaactgcaggaaaggaagaagttctttcttctgcattagcagaaatt
acaagtttaaacgaggaaactgcagctaaaagttctcaaattatggctctggagactcaa
atttcttctatcaaagaaaacctggataatgaacatgaaaagtggcgtgcagctcaagcc
aattatgaaagacaggttattctacaatcagagaccattcaggagttgactaaaacttca
caagaattggctttactgaaagaggaagcatctgagttgcgtaaagtggctgatgtccat
agaagtgaaaatactgaacttaaggctaagtgggagatggagaaatcaattcttgaggaa
tccaggaaagaagctgagaagaaatatgatgaacttaatgaacagaacaaaatattgcac
agtcgaattgaagctatgcatattcagttggctgagaaagatcgcggttctattccggat
tcacatggtgattatggtttgcagaatgtaattaattacctcagacggacgaaagaaata
gcagagactgagatatctttattgaagcaggagaagttacggttgcaatcacaacttgag
aatgctcttaaggcagaagcaaatgccaaagccacacttaatgctgagcgttccaattca
agagcagttttgatgactgaggatgagatcaagtctttacaacaccagattagggaaatg
aatttactccgggaaagcaacatgcagcttagagaggagaacaagcacaattttgaggaa
tgccaaaaattacgtgaggtggctcataaaagtaagattgaatcagaagctctagagagt
cggctgatggagaagcaatttgagcttgaaacttgtaaaagggaatttgaaaagcatcag
gcagagagagagatcttggaaaagagggtctctgagttacttgagagatgtagaaacatt
gatgtggaagagtatgatcgtctgaaaaatgatgttcagcagaatgaggaaaagctgaaa
gaaaaggatgctcagatagaagagataacaaaccttctgtctaagaagcaggatataata
tcaaaattggaacaagatcttgcaatcagcaagtcggagctcaatgagaaggataaaaag
ttgaatgatattttgcagtttgaggctaatctaaagtcggatatggagaagcagaagaag
cttgttcttcaatttaagaggagagctgagaatttcgcaaaagaaaaggatcaaatgagc
aaagaaaatcaagctctttcgaaactggtggaggaattgaaacaagtaggtagaaagcct
ggtagtgatattactggtgatcaagtcatgaaggaaaaagaggagaaagacactagaata
cagattctggagaaaactgttgagagacaaagagaagagttgaagaaagaaaaggatgaa
catcagaatgagaaaacaaaacgtatcaagtgtgaacggactattatggaagcagtcagg
aaaagtgaaaagggaaaagcaacagttttaggtgagcttgagaagtaccaactggctttg
aagcgtatctcagaagaactagaaaagctcaaacatgccgagggcaatcttcctcagggt
acctcggtggttcagcttctttctggcaccatctctgatgatcatgcttccccgtatctg
tctgctgcagaggattttgagagagtagcacgttcaattctaaatgagcttggaactggc
gccagttctggagatgttccttcagtagacagttctgctgccgtcttaacaggcacaaca
gttccggatcacggtcctgttactacatcctcaactctacctgtaacaagtcagcatcaa
ctagctaaagcatttgaagagaggagatctattgtacctaaaaccaatattgaaactcgt
aaaacggggaggaagcttgtccgcccacgttttgtgaaagctgaagaacggaaaggtgat
gtggagatgtcagaagctacgtcacatgatgttgatgctcaagggactcaacaatcagct
cgcaaacgtcaggcttctgccacaactgagttgagtgaggatttaccagttcctggggag
actagcgtggatgttgttgcacctgttcttaaaaaatcgaagggtccagattctggacaa
gaggctgctgaaggtcaagctgccgcacactctgaaaatcttggtgctcctcaagtaacc
gaagaacctgacgagactgttggtgatataactctaggttcaaatgaagaggttgttgat
gtggagaaggaagaggctgacacaatggaagaaaacttagaagagtcaaaagaaccccag
gtagatgggacgagtgaagctggattgcaggaaaataaaaacttgtcagacgaggtcttg
gataagccaagcggaaacgagatgataactgatgaagaaccaaagaatctagctgtgcaa
gaaagccaacagcccatgctagaaattgagagtgagaaggaagaaggcgaactggaccct
ggggtagcagctgatactgaaggaggtactgatgttcataatgtagttggatcctctgag
gttggtgggacagagctagtttcatctcctctggcttcaccttcaagggttgaagatgaa
tctctagtgactgcagcagaatgcgataactctcctgacgctgtaacttatgataagaat
gatgaaggtgacataggtgaagagactattagtgaaggatttgaaaagtccaatgatggt
aatgagcagagtgcaggagagacagatccaacgcctgaagctgccactgctgctgttgtt
acctctggcactaatgagagtggtgcaacaagcgggccaccagagggtgaggtctcaaaa
aacacaggtagttcaagcggtacagctgcagccgaagcagaggatgtgaaacagacgtct
cctataagtgggagtgggagtgcaactagtggagcctcaacattggtaaatcttcaagag
agagccagggaaagagccatgctaagacaggcaggagtagtcggttcttctaccacttca
agtagaggtcgtggaagggttgcagttcgtggtcgaggaggtaccaggggacgaagtgtg
cgtggtggacgggtgggcggagcagggacacaaaatcctgatcaacagtga
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integrated database retrieval system
