Hibiscus syriacus (Rose-of-Sharon): 120198867
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Entry
120198867 CDS
T09559
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11797
PH-interacting protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120198867
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120198867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WDR55
WD40_MABP1-WDR62_2nd
NBCH_WD40
Bromodomain
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Auxin_resp
Beta-prop_EIPR1
VPS8_N
WD_LRWD1
Caps_syn_GfcC_N
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
120198867
NCBI-ProteinID:
XP_039056043
LinkDB
All DBs
Position
Unknown
AA seq
1734 aa
AA seq
DB search
MALQKYVPSSDSPPVKMKPLRFSTKVQAQIANAETNDSEKRDADVDLREVYFLIMHFLSV
SPCKRTYGQLWNELLENQLLPRRYHAWYSRAGEHSGQENDDGMSFPLSYAQLVQRNPHIE
TDHLIKLLKRLLLTAPSQSEGKSARHIPNAADVPTLLGTGSFSLLSYDGNKGKSEAKHPP
VHMRWPHMHADQVRGLSLREIGGGFTRHHRAPSIRAACYAIAKPSTMVQKMQNIKRLRGH
RNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLASCRGHEGDITDLAVSSNNFMVAS
ASNDCIIRVWHLPDGQPISVLRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARNA
EIRPRIYFPKPSDSLAGKNNCSSSTSIQQSHQIFCCAFNANGTVFVTGSSDTLARVWIAS
KPNADDSDQPIREIDVLAGHENDVNYVQFSGCSVSSRYSTADCLKEESVPKFRNSWFSQD
NIVTCSRDGSAIIWIPRSRRSHGKVGRWCKHYHLKVPPPPLPPQPPRGGPRQRILPTPRG
VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHSLSGHTDSTYVLDVHPFNPRIAMSAG
YDGRTIVWDIWEGTPIRIYEIARFKLVDGKFSSDGTSIILSDDVGQLYILNTGQGESQKD
AKYDQFFLGDYRPLIHDTSGNSLDLETQLTTYMRNMQDLLCDSGMIPYTEPYQTMYQKRR
LGALGLEWKPCALNLSVGPNFTLDQDYQIPPLADLDAIAAPLPVFLDVMDWEPEIEVQSD
DNDSEYNVIEEHSTGGEQGSLGSLSGDSECSTEDSEIDDTHKDALRRSKRKKLKAEIEFM
TSSGRRVKRRNLDECDGNSFSNGPIRKSRNGRKALRRKSSTSKTSSKSSRPRRAAARNAL
HFFSKITGTSTDVEEYDSEGDSSESESMIQDSYVESDESDGDLPNGQIKLSKGKEVFFGE
SEDVAKTNALPESHNAAGNRRRLVLKFPARNPNKLVLPESTMERKVDIQENSIGLTWKAS
EEATEGGVKHISSPNMGCSSVDAKNIMIGRVSGQSDKVEDKDGGHVAIKWGVVKARTSKR
LKFGEPVSSDAYTGSTRWLCDHKEKENVANGYVEPEKAGATVSLCTDIKICKDDMNGKVT
MSEKNLGSEVELRDDPTHAEDHSGPSEHIKYPDSPKWVNGSSEDMHTLTSHLNGQLSEVK
EGHMPISTKLRFLSKSTTIDNENPGLKLKLSRGHANGGNATLIDSSSERAKDMVSEVPLV
DRFNDICSDNERDGFKESDAQVDRIPISTPLDLVGLQPDSKKMYNVVYRRSKTQRDRSNS
ENADAMVESTKIESSLDRSMVGDLHEGSTNGAPIKRSCRLKGHEIQSEDVHRSTWGSSTN
GSQLPSEEWGSSSRMAVGSRSTRNRRRNTYFNDPSPIRKPSQSARKGSWLMLTTHEEGSR
YIPQLGDEIVYLRQGHQEYAAHIGLKEAGPWTSSKGGSLLRAVEFCRVEGLEYSTSPGSG
DSRCKMTLKFTDPSSSMFDRSFNLTLLDMTSFPDFIVERTRFDAAMNREWGTRAKCKVWW
KDDSGDGGSWWDGRIVTVNPKSCEFPDSPWESLTVRYKSEPKNPQLHSPWELFDADLQWE
QPHIDSKIRNNLLSTFARLEKSSREAQDQYAVNKLKQVSQKSNFTNRYPVPLSIDVIQCR
LENNYYRTLEAVQHDIQVMLSNAESYFGRNKELLSKLKRLSEFFSRTFSSLQPS
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggctctccagaaatatgttccctccagtgattctcctcctgttaagatgaagcctttg
cgtttttccactaaggtgcaagctcaaattgcaaatgcagagacaaatgattctgagaag
cgggatgcagatgttgacctcagagaagtttactttttgattatgcatttcctttcagtt
agcccttgtaaaagaacgtatgggcagctttggaatgaactgcttgaaaaccagcttcta
cctagaaggtatcatgcttggtattcaagggcaggggaacatagcggacaagaaaatgat
gatggcatgtcatttcctttgagttatgcgcagttggtgcagaggaatcctcacattgaa
acagatcacttgataaagcttttgaagcggttgttattaactgcaccttcccaatctgaa
ggcaaaagtgcgagacacattccaaatgccgctgatgttcccactcttttaggaacaggc
tccttttctcttttgagctatgatggcaacaaaggaaaaagtgaagccaaacatcctcct
gttcatatgcgctggcctcatatgcatgcagatcaggttcgtgggctgagtttaagggaa
attgggggtggtttcacaagacatcatcgggcaccatctattcgtgcagcatgttatgcc
attgcaaaaccatcaactatggtgcagaagatgcaaaatatcaagaggttgcgaggacac
cggaatgctgtctattgtgcaatatttgatcgatctgggaggtatgtaattactggttct
gatgaccgtcttgtgaaaatttggtctatggagactgcatattgcttggctagctgccgc
ggacatgagggtgacataactgacctggctgtcagttccaataattttatggtggcgtcc
gcttcaaatgactgcattattcgtgtttggcacttgccagatggacaaccaatttcagtt
cttagaggacatactggagctgttactgccattgcttttagtcctaggccaggctctgta
tatcagcttctatcgtcatctgatgatggaacttgtaggatatgggatgctaggaatgct
gaaatccgtccccggatatattttccaaagccttcagattctttagctggaaagaacaac
tgttcatcttcgacttctatacaacagagccatcaaattttttgttgtgctttcaatgct
aatggaactgtctttgtcaccggtagctcggacactttagctagggtatggattgcttct
aaaccaaatgcagatgattctgaccaaccaattcgtgagattgatgtgttagctggacat
gagaatgatgtaaattatgtgcaattcagtggttgttctgtttcatcaagatattctaca
gcagactgcttgaaagaagagagtgttccaaaatttagaaactcctggttttctcaagat
aacattgttacctgctcccgtgatggcagtgcaattatttggattccaagatctcgaaga
tcacatggtaaagtgggtcgctggtgtaaacattatcatcttaaagttccacccccacca
ttgcctccacaaccaccaagagggggtccacgccagagaattcttccaactcctcgtggt
gtaaatatgataatctggagcctagataaccgctttgtccttgctgccatcatggattgc
agaatatgtgtatggaatgctgctgatggtagcttggtacattctttgtctggtcatact
gattctacatatgttttggatgttcatcctttcaacccacggatagcaatgagtgcgggc
tatgatggaagaaccattgtctgggatatatgggaaggcacaccaattcgaatatatgaa
atcgctcgtttcaagttggttgatggaaagttttcatcggatgggacatccattatactt
tcagatgatgttggtcaattatacatactaaatacaggccaaggtgaatctcagaaggat
gccaaatatgatcagttctttctgggtgattatcgaccacttatacatgacacctctggg
aattcacttgatctggaaactcagcttactacgtatatgcggaatatgcaagatcttctt
tgtgactcagggatgataccatacacagaaccctatcagaccatgtaccagaaaagacga
ttgggtgctttaggtttggagtggaaaccttgtgctttgaacctttctgtgggaccaaac
ttcactctagaccaggattaccaaatcccacccttagcagacttagatgcaattgctgct
ccgctgccagtattcttagatgtcatggattgggaaccagaaattgaagtgcaaagtgat
gataatgattcagagtataatgtcattgaggagcactctacaggaggggagcaaggaagt
ttaggttctctctctggtgattctgagtgcagtacagaagacagtgagattgatgatact
cataaagatgcccttcgccgatcaaaaaggaaaaaactgaaggctgaaattgagtttatg
acatcttctggtaggcgtgttaaaagaaggaatttggatgaatgcgatggcaactccttc
agtaatggccctattaggaaatcaagaaatggaaggaaagctttacggagaaagtcttct
acatcaaaaacttcttcaaaatcatcgagacctcgaagagctgctgcacgcaatgcttta
cacttcttttctaaaataactggaacatcaactgatgttgaagaatatgattctgaaggt
gactcatctgagagtgaatctatgatacaagattcttacgttgagagtgatgaatctgat
ggagatttgccaaatggacaaatcaaactttcaaaaggaaaagaagttttctttggtgag
tctgaggatgttgctaaaaccaatgcacttcctgaatctcataatgctgctgggaatagg
agaagattggtccttaaatttcctgcgcggaatccaaacaaacttgtactacctgaaagc
acaatggaaagaaaagttgacatacaggaaaattcaataggtctgacgtggaaagcttct
gaagaagctactgaaggtggtgtaaaacatataagctcgccaaatatggggtgttcttct
gttgatgctaaaaatatcatgattggtagagtaagtgggcaatcagacaaggttgaagat
aaagatgggggacatgtggcaattaagtggggagtagttaaggctcgtacttccaaacgt
ctgaaatttggtgaacctgtgtcatcggatgcatatactggatctacgcgatggctttgt
gaccataaagaaaaagaaaatgttgccaatggatatgtagaaccagaaaaggctggtgct
actgtatccctgtgtacagatatcaaaatttgcaaggacgatatgaatggtaaggtgaca
atgtcggagaagaaccttgggagtgaagtggaacttcgggatgatccaactcacgctgag
gaccattcaggtcctagtgaacatataaaatatcctgattcaccaaaatgggttaacgga
tcttccgaggatatgcataccctaacttctcatctgaatggacagctttctgaggtaaaa
gagggccatatgcctatttcaactaagttaagatttttgtcaaaaagtacaactattgac
aatgaaaatcctgggttgaaactgaaactatcaagaggtcatgcgaatggtggaaatgcc
actttaattgatagctcctcagagagggcaaaggacatggtttcagaggtacccttagtt
gatagattcaatgatatctgttcagataatgaacgtgatgggtttaaagaatcagatgcc
caagttgatagaattcccatatcaactcctcttgatttggtggggttacaaccagattca
aaaaagatgtataatgttgtttatcgaagatcaaagacacagagagataggtccaactca
gaaaatgctgatgccatggtagaaagcactaaaattgaatccagccttgatagaagtatg
gtaggggacctccatgagggttcaacaaatggggctcctattaaacggtcctgcaggttg
aaagggcatgaaattcaatcagaagatgtacatagaagcacctggggtagttctacaaat
ggatctcaacttccgagtgaggaatggggatcaagttcaaggatggcagttggatcgagg
tctactagaaataggagaagaaatacctatttcaatgaccctagtccaatacggaaaccc
agtcaatcagccagaaaagggtcatggttaatgttgacaacacatgaggaagggtctcgc
tatattccccaactaggtgatgaaattgtatacttgagacagggacatcaagaatatgca
gctcatattggcttgaaggaagcaggaccttggacttcatctaaaggagggagcttgtta
agggcagtggaattttgtagagttgaagggcttgaatattctacgtctccggggtctggg
gatagtcgctgtaaaatgacgctcaaatttacagacccttcttccagcatgttcgacaga
tcatttaacttgactttactggatatgactagtttccccgacttcattgtagaaagaact
cgctttgatgctgctatgaatagggaatggggcaccagggctaagtgcaaagtctggtgg
aaagatgacagcggagatggtggaagctggtgggatggtcggattgtgactgtgaatccc
aaatcttgtgaatttcctgacagtccttgggaaagcttaactgttcggtacaagagcgag
cccaagaatccacaacttcacagtccatgggaactctttgatgctgatttgcagtgggag
cagcctcatattgatagtaagatcagaaacaatctactttccacctttgccagattggag
aaatcttcacgcgaagctcaggatcaatacgcagtaaataagttgaagcaagtttcacag
aagtctaattttacaaacaggtaccctgtgccattatcgatcgatgttattcagtgtagg
ttggagaacaactattatcgaaccttggaagcagtgcagcacgatattcaggtcatgttg
tcgaacgcagaatcttactttgggagaaacaaagagctcttatctaaactcaaacgcctg
tccgagttcttttcgcggacattttcatctttgcaaccttcatag
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