Hibiscus syriacus (Rose-of-Sharon): 120199295
Help
Entry
120199295 CDS
T09559
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120199295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120199295
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120199295
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120199295
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120199295
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120199295
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120199295
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120199295
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120199295
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120199295
Exosomal proteins of other body fluids (saliva and urine)
120199295
Exosomal proteins of breast cancer cells
120199295
Exosomal proteins of colorectal cancer cells
120199295
Exosomal proteins of bladder cancer cells
120199295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Mito_fiss_Elm1
Motif
Other DBs
NCBI-GeneID:
120199295
NCBI-ProteinID:
XP_039056352
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MASANALSSASVLCSTNQASLRWKGIQKQNQRLNHRQGKNRFAVRACAKEIAFDQRSRAA
MQAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPNAMENAGAALIRE
VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKRGIDKTVQSLVEELEKKAR
PVKGRDDIKAVASISAGNDDLIGTMVADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID
RGYISPQFVTNPEKLICEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG
EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQASDMGLLVENTSVEQ
LGIARKVTITKDSTQLIAEAASKDEIQARVAQLKKELAETDSVYDSEKLAERIAKLSGGV
AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKLEEA
DERIGADIVQKALVAPASLIAQNAGMEGEVVVEKVKNSEWEIGYNAMTDTYENLLEAGVI
DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKAPVAAGPPEGSLMV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgcaaatgctctttcttcagcttctgttctttgctctaccaaccaggcaagt
ttgaggtggaagggaattcagaagcagaaccaaaggctaaaccataggcaaggaaaaaac
cgatttgctgtgagggcttgtgccaaggaaattgcttttgaccagcgttcaagagctgca
atgcaggctggcattgataagctcgctgatgctgttggccttactcttggtcctaggggg
aggaacgttgtgttggatgaatatggaagtccaaaggtagttaacgatggggtgacaata
gctagagctattgagcttcctaatgccatggaaaatgctggtgcagctcttatcagagag
gttgcgagtaaaacgaacgactctgcaggtgacgggacaactacggcatctgttcttgca
cgtgaaataatcaaacttggacttttgagtgttacctctggtgcaaatccagtctccgtg
aaaaggggtattgataaaactgtacagagtttggtcgaggaactagaaaagaaggccagg
cctgtcaagggccgtgatgatatcaaagctgtggcttcgatttctgctggaaatgatgac
cttattggaactatggttgctgatgcaattgacaaagttgggcctgatggtgtattgtcc
attgagtcatcgtcctcatttgagaccaccgtggatgttgaggaaggaatggagattgat
agaggttacatctcaccgcagtttgtaacaaatcccgaaaagttaatttgtgaatttgag
aatgcaagagtgctagtaaccgatcaaaagatttctgctataaaggatataattcccttg
ttggagaagactactcagttaagatctcctttgctaataattgctgaggatgtcactgga
gaagctctggccacccttgtggtaaacaaactgcggggcatcctaaatgttgcagccatt
aaggctcctggttttggtgaaaggagaaaagctctccttcaagatattgccattgtgact
ggggctgagttccaagctagtgatatgggtttgctggttgagaacacatctgttgagcag
cttggtattgccagaaaagtgaccattactaaggattcaacccaactaattgctgaggct
gcttcaaaggatgaaatacaagctagggtggcacaattgaagaaagagctagctgagaca
gattctgtttacgactcggaaaaattggctgaaaggattgctaaactatctggtggtgtt
gcggtcattaaggttggggctgccacagagactgaacttgaggatcgcaagctacgtatt
gaagatgccaagaatgctacctttgctgccatagaggaagggattgtgcctggtggtggt
gctgcattagttcatctctcaacttgtgttcctgcaatcaaggacaagcttgaagaggct
gatgaacgcattggagctgatatcgtgcagaaggctctggtggcacccgcctctttgata
gctcaaaatgcaggtatggaaggcgaggttgtggtcgagaaggtgaagaacagtgaatgg
gagattggttacaatgcaatgacggacacgtacgagaacttgctggaggctggagttatt
gaccctgcaaaggtgacaagatgtgcgctgcagaactcagcttcagttgcaggaatggtc
cttacaactcaggccattgttgttgagaaacccaagcctaaggctcctgttgctgctgga
cctccagaaggtagccttatggtttaa
DBGET
integrated database retrieval system
