Hibiscus syriacus (Rose-of-Sharon): 120199325
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Entry
120199325 CDS
T09559
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03030
DNA replication
hsyr03410
Base excision repair
hsyr03420
Nucleotide excision repair
hsyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120199325
03410 Base excision repair
120199325
03420 Nucleotide excision repair
120199325
03430 Mismatch repair
120199325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120199325
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120199325
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120199325
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120199325
DNA Replication Termination Factors
ELG1-RFC complex
120199325
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120199325
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120199325
Check point factors
HRAD17(Rad24)-RFC complex
120199325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND_NTPase5
AAA_22
Rad17
Mg_chelatase
AAA_16
Viral_helicase1
AAA_lid_RFC1
nSTAND3
AAA_11
AAA_5
RuvB_N
RCF1-5-like_lid
AAA_28
AAA_19
AAA_assoc_2
MeaB
AAA_25
AAA_30
AAA_18
AAA_3
ABC_tran
RNA_helicase
IstB_IS21
bpMoxR
KTI12
NTPase_1
AAA_24
DNAX_ATPase_lid
AAA_7
NPHP3_N
AAA_29
SLFN-g3_helicase
Rotavirus_VP3
T2SSE
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
120199325
NCBI-ProteinID:
XP_039056372
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MASSSSSTAAGYDVPWVEKYRPNKVSDIVGNEDGVSRLQVIARDGNMPNLILSGPPGTGK
TTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKVIEPIQSRCALVRFSRLSDQEILGRL
MVVVGAEKVPHVPEGLEAIIFTADGDMRQALNNLQATYSGFHFVNQENVFKVCDQPHPLH
VKNMVRHVLEGKFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLILEFMKETGF
AHMRICDGVGSYLQLCGLLAKFSLARETAKAGIS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcttcatcgtccaccgccgccggttacgacgtgccctgggttgaaaaatac
cggccaaacaaagtctctgatatagtcggcaatgaagacggcgtatctcggctccaagta
atcgctcgcgatggcaacatgcccaatctcatcttatccggtcctcccggaactggtaaa
acaactagtattttggctcttgcacatgagcttttggggccaaactatagggaggctgtt
ttggagcttaatgcatctgatgacaggggaatagatgttgtccggaacaaaattaagatg
tttgctcaaaagaaagtaactttacctcctggacgacacaagatagttatcctggatgaa
gctgacagcatgacatctggtgcacaacaagccttgaggaggacaatggaaatatattca
aattctactcgttttgctcttgcttgcaatacatcatcaaaagttattgagcctattcag
agtagatgtgcacttgtccgattttcaaggctatctgatcaagagattctaggccgtctc
atggtggttgtaggtgctgaaaaggttccgcatgttccagagggtcttgaagctatcatt
ttcactgctgacggtgatatgaggcaagcattgaacaacttacaagctacatacagtgga
tttcattttgtcaaccaagaaaatgttttcaaggtttgtgaccagcctcatccattgcac
gtgaagaacatggttcgccatgtacttgaagggaaattcgatgatgcttgtttgggtctg
aagcaactctatgatttggggtattctccaactgatataatcacgacacttttccgaata
ataaagaattatgatatggctgagtacttgatactggaattcatgaaggaaaccgggttt
gcgcatatgcgaatctgcgatggagttggttcatatcttcagttgtgcggacttctggcg
aagttttcgctagcccgtgaaaccgctaaagctggcataagttaa
DBGET
integrated database retrieval system
