Hibiscus syriacus (Rose-of-Sharon): 120200331
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Entry
120200331 CDS
T09559
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120200331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120200331
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120200331
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120200331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_6
zf-Di19
zf-RING_14
FAIM1
Motif
Other DBs
NCBI-GeneID:
120200331
NCBI-ProteinID:
XP_039057135
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MAPGGGFCVKAVESHPPVADSSTVPTTSKSNTTTKRSAVNVLGKRGIRSNNGVYELLECS
VCTNLMYPPIHQCPNGHTLCSNCKNRVLNCCPTCRRDLGNIRCLALEKVAESLEFPCRYQ
NLGCLDIFPYYDKLKHEQNCRLRPYNCPYAGSECSVTGDIPKLVAHLKDDHKVDMHDGCT
FNHRYVKMNPREVENATWMLTVFNCFGRKFCLHFEAFQLGKAPVYMAFLRFMGDDNEAKR
FGYSLKVGANGRKLIWQGIPRSIRDSHRKVRDSLDGLVIQRNLALYFSGGDRRELKLRIT
GRIWKDE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctccgggaggtggtttttgtgtaaaagctgttgaatctcacccccctgttgcggat
tccagtacagttccaacaacatctaagagcaatactacaacgaagagaagtgctgttaat
gttcttgggaaacgtggaatccgttcaaacaatggtgtttacgagctccttgagtgttca
gtatgtacaaatttgatgtatccaccaattcaccagtgccccaatggacatactttgtgt
tcaaactgcaagaatagagtgctcaactgttgcccgacgtgccgccgtgatcttggaaat
ataaggtgtttagccttggagaaagttgcggaatcattagagtttccctgtagataccag
aatctcggatgcctcgatatcttcccctattacgacaagcttaagcacgagcagaactgt
aggcttcgtccctacaattgcccttacgctggatcggagtgctctgtaacaggtgacatc
ccgaaactcgttgcacatctcaaggatgatcataaggttgacatgcatgatggatgtacc
ttcaaccaccgatacgttaaaatgaacccacgcgaagttgaaaatgccacttggatgctt
actgtgttcaattgtttcggacgaaagttctgcttgcatttcgaagctttccagctcggg
aaggcacccgtctatatggcgtttttacgttttatgggcgacgataatgaagcaaaaagg
ttcggttatagtttgaaagtcggtgccaacggtcgtaagctaatatggcaagggattccg
aggagcatccgggacagtcataggaaagttcgtgacagtctggacggactcgttatacag
aggaacctagctctatatttttcgggtggcgataggcgagagctgaagttgaggataacc
ggtcgtatatggaaagacgaatga
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