Hibiscus syriacus (Rose-of-Sharon): 120200652
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Entry
120200652 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120200652
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120200652
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120200652
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120200652
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120200652
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
120200652
DSBR (double strand breaks repair)
Other DSBR factors
Others
120200652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
PEP5_VPS11_N
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
120200652
NCBI-ProteinID:
XP_039057365
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MASQNLTEYERKRLENIKRNEEMVAALKIHSKAATLSADTKRQRKTYKVSPVKKPKTETP
IVIRRSLRTRGMPPDSNGLPDDFSENFDKTPKSVSPLKPQSPRVSGPISMKDAFSGDEVE
SNHVFVGTILSIARKPXDNVSSKEEFNGVKDIQDENFSEKRTLGSCKSEAFESPVKEELD
ENFSGERKSAKCLVKNEHLDGLVKIEKRDPWLESLDLKPENVARIMPGRIMVVKFFPSSS
MRMVAAGNKFGNIAFWNVDSKDEKEDGIYLYRPHSGPISGILLQQYSMSKIYSSCYDGFI
RLMDAEKELFELVHSSDDTVYSLSQQANNSANLYFGEGRGGLNVWDIRTGKSSKSWMLHE
DRINTISFNLQNSNIMATCSTDGTACIWDLRIMSTRKPKTLRLVSHDRAVHSAYFSPSGS
SLATTSLDNNVGITSGANFEDTSMIYHNNWTGRWISSFRGIWGWDDSYIFIGNMKRGVDV
ISPAQRQKVMTLQSPEMSAIPCRFDAHPCEVGMLAGATSGGQVYIWAPC
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcagaatctaactgagtatgaacgcaaaagacttgaaaacattaagagaaat
gaagagatggtggccgcactcaagatacactcgaaggccgccactctctccgccgatacc
aagcgccaaagaaaaacatataaagtgagtccagtgaagaaacccaagacagagaccccg
atcgtaattcgacggtcgttgagaacaagaggtatgccaccggattcaaatggtttgcct
gatgatttcagtgaaaatttcgataaaacccctaaatctgtcagccctttaaagccacaa
tcgcctcgtgtttcgggtcctatcagtatgaaagatgctttcagtggagacgaagtagag
tctaatcacgtgtttgttgggacaattttaagtattgctaggaaacccntagacaatgtt
tcgagtaaagaagagtttaatggtgttaaggatattcaagacgagaattttagtgagaag
agaacattgggttcctgcaaaagtgaggcttttgaatcaccggttaaagaagagttagat
gagaatttcagtggagaaagaaagtccgccaagtgcctggttaaaaacgagcatttggat
ggtttagttaagattgagaagagagatccatggttggaatcattggatttgaaacctgaa
aacgtcgcacgaattatgcctggaaggattatggtggttaagtttttccctagcagcagc
atgaggatggttgccgctgggaacaaatttgggaatattgcattttggaatgtggattct
aaggatgaaaaggaagatggtatatatctttaccgcccgcattccggtcctatatctggc
attttgcttcaacaatattctatgtcaaagatttatagcagctgctatgacgggtttatt
cgattaatggatgccgagaaagaattattcgagctggtgcattcttctgatgatactgta
tattccctctctcaacaggctaataattcggccaacctatattttggtgaaggtcgcgga
ggattgaatgtctgggatattcggaccgggaaatcaagcaaaagttggatgctccatgaa
gataggatcaacaccataagcttcaacttgcaaaactccaacattatggcaacatgttca
acggatggcactgcctgcatttgggatttaaggattatgagcactcgtaaacccaaaaca
ttgaggcttgtgagccatgatagggctgttcattctgcttacttctcaccctctggaagc
tctcttgcaacaacaagtttggacaacaacgttggtataacaagtggagctaattttgag
gacacttctatgatataccataataattggaccggcagatggatttcttctttcagaggt
atatggggttgggatgattcgtacatattcatcggcaacatgaaaagaggcgttgatgtg
atatctccggcacaaagacaaaaggtaatgacattacagagcccagaaatgtctgctatt
ccctgcaggtttgatgcacacccatgtgaagttgggatgctagcaggtgccacaagtggg
ggtcaagtttatatatgggcaccgtgttag
DBGET
integrated database retrieval system
