Hibiscus syriacus (Rose-of-Sharon): 120200748
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Entry
120200748 CDS
T09559
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03030
DNA replication
hsyr03410
Base excision repair
hsyr03420
Nucleotide excision repair
hsyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120200748
03410 Base excision repair
120200748
03420 Nucleotide excision repair
120200748
03430 Mismatch repair
120200748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hsyr03032
]
120200748
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120200748
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120200748
DNA replication proteins [BR:
hsyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120200748
DNA Replication Termination Factors
ELG1-RFC complex
120200748
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120200748
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120200748
Check point factors
HRAD17(Rad24)-RFC complex
120200748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
ABC_tran_Xtn
AAA
Motif
Other DBs
NCBI-GeneID:
120200748
NCBI-ProteinID:
XP_039057439
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MANKSKHINKNRQGSTTNAIPSPTTRPRRSSSDPDLTIKTSKAETLVVIPRLSRSSASTH
RREKSSYWISWSNISKLGDFIDRRRKESDLTEESLGAHNEFHGILPHKVHVTNFIAGMND
ERNNKCSPYYKGLTDSTLSINREKKSGPDNSPDRESQATTAANSSSSFSSMLGKVQEFGS
SCFTCRTTGDHYKDPSTPADVLKPVKATSFSSSTCNKTTTRLEKKEVDDPLDVQLVVEEK
PLRERVWEPATTPKDADVYKVHQKYILADKYQPKTLKDFICNRSEVTRLQVLVKSGECNH
IIFEGPPGVGKRTMILAMLREVFGPDQVQTRDELKAFHLKGESVGRIEVNVKESDKHIEV
NLSDLRGYEKHVIVELMKETQAKNSKSNKALSNDPENCRTIILCEADKLSPDALLYIRWL
LERYKAGNKVFFCCSNVSKLQPIRSLCTVIKLLPPSKEEIVRVLEFIAKQEGLSLSHKFA
ERIAESSKNNLRQAIRSFEACRESSYPFKEDQKILSGWEEDIANIAKNMVEERSTKQLYI
IRRKLQNLVEHDVSPDFIFMSLVEEVKKQLQDSLHHQVDCLFEEYNRDDENMIESEDDME
TKDSRVFSRIEEFIARFMSWFNKQSKMATAALAHVQGT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaatcaaagcatattaacaaaaaccggcagggcagcacaacaaatgcaatt
ccgagtccaactactcgcccccgacgctcctcatctgatccggacctcaccatcaagaca
tccaaagccgagaccctcgtcgtcatcccccggttgagtcgatcctcggcctccactcat
cgtcgtgaaaaatcctcctactggattagttggagcaacatcagtaaactaggcgacttc
atcgatcgaagaagaaaagagtctgatttaacagaggagagtctcggtgcacataatgag
tttcatggaatacttcctcataaggttcatgtcaccaatttcattgctggcatgaatgat
gaaaggaacaataagtgcagtccttattacaaaggactcactgattccaccctttctata
aaccgcgaaaagaagtctggacccgacaacagtccggatcgagagagtcaagcaactact
gcggccaattcatctagctcgttttcgagtatgttgggtaaagttcaagaatttggttct
agttgttttacttgtaggacaactggtgatcattacaaggacccctctactccagctgat
gttctgaaacctgttaaagcaactagtttttcgtcgtcaacgtgtaataaaacaactaca
aggctggagaaaaaggaggtcgacgatcctcttgatgttcagttagtagttgaggagaag
ccattgagggagagagtatgggaaccggcgactacaccgaaagatgccgatgtttacaag
gtgcaccaaaagtacatattggcagacaagtaccaacccaaaactttaaaagatttcatc
tgcaatagaagtgaggtcactcggttgcaggttctggtgaaaagtggagaatgtaatcac
attatatttgaaggacctcctggtgttggcaagagaaccatgattttggctatgcttcga
gaagtttttggacccgaccaagttcagacaagggacgagctcaaggcttttcacttgaag
ggggaatcagtaggaagaatcgaagtaaatgtaaaggaatctgacaaacacatagaagtc
aatctgtcggatctaagaggatacgagaagcatgtgattgtggaactaatgaaggaaaca
caagcaaagaactccaaatctaataaagctttgtccaacgaccctgaaaactgtagaacc
attattttatgtgaagcagacaaattaagcccagatgctttattgtacatccgatggctg
ttggaaaggtataaagctggcaacaaggttttcttctgctgctccaacgtgtctaagctt
cagccgattaggtcactttgcacagtcattaagctattaccgccctcgaaagaagagatt
gttcgagtcctggaatttatagctaaacaagaaggcctgtctttgtcccataagtttgct
gaaaggattgctgaaagttcaaagaataatctgcgtcaagccattcgttcattcgaagcc
tgtagggaatcaagttatcctttcaaggaagaccaaaaaattctgtccggatgggaagaa
gacattgcaaatattgccaaaaacatggtagaggagcgaagcacaaaacagttatatata
atccgcagaaagcttcaaaatctggtagagcatgatgtgtctcccgacttcatattcatg
tcattggtggaagaagtgaagaagcagttgcaggatagcctgcaccatcaagtagattgt
ttatttgaagaatacaatagggatgatgaaaatatgattgagagcgaagatgatatggaa
acaaaggacagcagggttttctcaagaatcgaagagtttatagccagattcatgagctgg
ttcaataaacaatcaaagatggcgactgcagccttggcccacgttcaagggacttga
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