Hibiscus syriacus (Rose-of-Sharon): 120201737
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Entry
120201737 CDS
T09559
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120201737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120201737
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
120201737
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
120201737
NCBI-ProteinID:
XP_039058219
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MQRQKPIFSSSQKPSSAGQNVAVGELKCRGASQFPSTQNQNGDVCGSSVEVTGTDTPPEK
ETRKVFPENFATNVGGSGSSSLFSSIMHKFVKVEDQGKGSRRNHAGVDCSNVEELPKVGL
TSQPTEKTNVINVEDGDDLRPETPATKPGVSRLKRIQDYFPKFGDKKDSSVLDSGKRVKL
IQESIVGNNNHRNDTDAARKFGWLDPSCIKDANSADKKDSSLLDSSKRVKLLQESIVRNS
NNQNGTDVASKFGWLDSSCIKDANGRRPCDPLYDKKTLYIPPDVLKTMSASQKQYWSVKC
QYMDVVIFFKVGKFYELYEIDAEIGHNELDWKMTISGVGKCRQVGISESGIDDAVHKLVA
RGYKVGRVEQLETSEQAKARGANSVIRRKLVEVITPSTTVDGNIGPDSVHLLAIKEENYG
VENGSTAYGFAFVDCAALKFWVGSISDDATCSALGALLMQVSPKEVIYERRGLSREAHKA
LKKYSFSGSTAVQLSPGNPTDFLDASEVRNMIQSHGYLKGSPNSYIKAFDGIVHHDIAVC
ALGGLVSHMSRLMLESILQSGDVLPYQVYQGCLRIDGQTLVNLEIFSNNADGGSSGTLYK
YLDNCVTSSGKRLLRSWICHPLKDVGSINNRLDVVEKLKSHIEIMLIIPQYLRKLPDLER
LLGRVKASVQSSASLLLPMIGKKVLKQRVKAFGTLVKGLGIGMDLLRLFQKDTNMESPLS
KVFELPILSGTNGLDEFLTQFEAAIDSDFPNYQNHDITDADGETLSILIELFIEKASQWS
QVIHALNCIDVLRSFAVTASLSSGTMARPVVLPPSNTMTSNQETGPVLKITGLWHPFALG
KSEVPPVPNNIFLGEGVNDCHPRALLLTGPNMGGKSTLLRATCLAVILAQLGSFVPSETC
IISLVDTIFTRLGSSDRIMTGESTFLVECSETASVLQNATQDSLVLLDELGRGTSTFDGY
AIAYAVFRHLVEKVHCRLLFATHYHPLTKEFASHPHVTLQHMACSFQSTSKGEQELVFLY
QLTNGACPESYGMQVAMMAGIPKNVVEAAYKAAQVMKRTVGESFRSSEQRSEFSSLHEEW
LKTLVNLSEVRNRDFDDGDAYDTMFCLWHELKKFIWSRKLSTKEAFDFQIALQGPFSPLN
MYMFIICYMILLF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccaaaaaccgatattctcgtcctcgcaaaagccttcgtcggcgggccaaaac
gtcgccgtcggagagctaaaatgccgaggagcttctcagtttccttcaactcagaaccag
aatggcgacgtttgtggctcgtctgtagaagtcactggaactgatactccgccggagaag
gagactcgcaaggtgtttccggagaacttcgcaacgaatgttggtggtagtggctcttct
tccctgttttctagtatcatgcacaagtttgtgaaggttgaagaccaaggaaaaggaagt
cggaggaaccatgcaggtgtcgattgttcgaatgtagaagaattgcctaaagtggggtta
acctctcaaccaacagaaaagaccaatgttataaatgttgaggatggtgatgatctcagg
ccagaaacacctgctacaaaacctggtgtttctcgtttgaagcggattcaagattatttc
cctaagtttggggataagaaggatagttctgtattagattccggtaaaagagtaaagctt
atccaggaatctattgtcgggaacaataatcataggaatgatactgatgctgctaggaaa
tttggatggcttgatccttcttgcatcaaggatgctaatagtgcggataaaaaggatagt
tctttattagactccagtaaaagagtaaagcttctccaggaatctattgttcggaacagt
aataatcagaatggtactgatgttgctagcaaatttggatggcttgattcttcttgcatc
aaggatgcaaatggaagaaggccttgtgatcccctttatgacaagaagactctttatata
cctcctgatgttctcaagacaatgtcagcatctcaaaaacaatattggagtgtcaaatgt
caatatatggatgttgttatcttctttaaagtggggaaattctatgagctctatgagata
gatgctgaaattggccacaatgagcttgattggaagatgacaataagcggagtgggcaaa
tgccgccaggttggtatatcagaaagtggaatcgatgatgctgttcataagctggttgct
cgtggatacaaagtgggacgtgtggagcagttagagacatctgagcaagcaaaagctagg
ggtgcaaattctgtcattcggagaaaattagttgaagtgatcaccccatcaacaacagtt
gatggtaacattggacccgattctgttcatctacttgctattaaggaggaaaactatggg
gttgagaatggttcaactgcatatgggtttgcctttgttgattgtgctgctctaaaattt
tgggttggctccatcagtgatgatgctacctgttctgctctgggagctctcttgatgcag
gtgtcccctaaggaagtcatatatgaaagaagagggctgtccagagaagctcataaagca
ctcaagaaatactcatttagcggatctactgcagttcaactgagtcctggaaaccctact
gattttctggatgcttctgaagttagaaatatgattcagtcgcatggttacttaaagggg
tcacctaattcatatattaaagcttttgacggtatagtgcaccatgacattgcagtgtgt
gctcttggtggattggtcagtcatatgtcacgattgatgctggagagcattttacagagt
ggagatgttttaccctaccaagtttaccaaggttgcctcagaattgatggccagacacta
gtaaatcttgagattttcagtaataatgctgatggtggttcttcaggtacattgtataaa
tatcttgataactgtgtgacctcatctggaaaacgccttttaaggagctggatttgccat
ccactaaaagatgttggtagcattaataacaggctagacgtggttgaaaaacttaagtca
catatagaaattatgttaatcattcctcagtatcttcgcaaacttcccgacttggaaagg
ttactcggacgtgttaaggctagcgtccaatcatcggcttctcttcttcttcccatgata
ggcaaaaaagtattgaaacaacgggtaaaagcttttggtacacttgtcaaaggtctcggg
attggaatggacttgttaaggctatttcagaaggatacaaatatggaatctccattatca
aaagtttttgaacttccaattctaagtggtactaacgggcttgatgaattccttactcaa
tttgaagcagctatagatagtgacttcccaaattaccagaatcatgatataacagatgcg
gatggtgaaacactttctatactgatcgagttatttattgaaaaagcttctcaatggtct
caagttattcatgccctaaactgcatcgatgtcctaagatcttttgcagtaactgcaagt
ttatcatctgggaccatggcaaggcctgttgtattgcccccgtcaaataccatgacttca
aaccaagaaacaggaccagtgcttaaaattacaggactttggcacccatttgcccttggg
aagagtgaggtaccacctgttccaaacaacattttccttggtgagggtgtaaatgactgt
catccccgtgctttgctattgactggaccgaatatgggtggaaagtcaactcttttacgt
gccacttgtctggctgttatactggcccagctgggtagttttgttccctctgagacatgc
attatctcacttgtggatacaatctttacaaggcttggttcttctgatcgaataatgact
ggcgagagtacctttcttgtggagtgctcggaaacagcatcagttcttcaaaatgctaca
caagattcccttgttcttcttgatgagctgggtagaggaacaagtacttttgatggatat
gcgattgcatatgcagtgttccgccatcttgtcgaaaaggttcattgccggctgttattt
gcaacacattaccatccgctgacaaaggaattcgcatctcacccacatgttacactgcaa
cacatggcttgctcttttcagtcgacatctaaaggcgagcaagagcttgttttcctatat
cagctcactaacggagcatgcccggagagttatggtatgcaagttgcaatgatggccggg
atcccgaaaaatgtagttgaagctgcctataaggctgcacaagtaatgaaaagaactgtt
ggggagagttttaggtcaagtgaacaaagatcagagttctcatctctccacgaagagtgg
ttgaagacccttgtaaatctttcagaggttcgaaatcgtgacttcgacgatggcgatgct
tatgacacgatgttctgcttgtggcatgagctaaaaaaattcatatggagtcggaaacta
agtacaaaagaagcttttgatttccagattgcattgcagggtcccttttcccccctaaac
atgtacatgttcattatctgttatatgattctgctgttttag
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