KEGG   Hibiscus syriacus (Rose-of-Sharon): 120202082
Entry
120202082         CDS       T09559                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hsyr03009]
    120202082
Ribosome biogenesis [BR:hsyr03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    120202082
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_TEP1_C EIF3I NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_2nd Beta-prop_SCAP Beta-prop_WDR19_1st Ge1_WD40 WDR54 Beta-prop_BBS7 Beta-prop_LRRK2 PEP5_VPS11_N Beta-prop_DCAF12 PROPPIN
Other DBs
NCBI-GeneID: 120202082
NCBI-ProteinID: XP_039058495
LinkDB
Position
Unknown
AA seq 443 aa
MNVVIASSSIDGGIGCWDLQTGAEQLRYKTCASPPHGLASIGCCFLACSQLRDPSATSGH
VLYWSWSKPQAQVKSFPAEPIKPLAANSEGSYIVGGGSSGDIYFWEVASGRLLKKWHAHY
RAVTCLVFSEDDSVLISGSEDGCVRVWSLFMIFDNVRQQQASHLYEYSFTEHTLRITDIV
MGYGGWNAIIVSASEDRTCKVWSLSRGRLLRNVVFPSIIDAIAIDPGEHVFYAGSRDGKI
YIAALNAESPPSNNYGLHIIGSLTDQSKPVTCLAYSAEGNLLLSGSEDGMVRVWDVKTKN
IIRMFRHSKGPVNNILIVRLPYPFTRTESKVQASSRRHESLRPPLEKYANSSDEDMDNKA
IIALPDTIDLPSYLSSQLINDHVKQLQQQGSSAAAEMEVKRLKLDGQRSMEMFQQLKKVY
DNLQEFCVNELLDGQAMEGSKGN
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaatgtagtaatagcatcatcttcaatcgatggcggcataggttgctgggacctacaa
acaggggcggagcaactccgttacaagacttgtgcctcacctccccacggtcttgcctcc
ataggttgctgtttcctcgcctgctctcaacttcgcgacccctccgccacctccggccac
gtcctttattggtcttggtccaagcctcaagcgcaagttaaaagctttcccgcggaacct
attaaaccgcttgctgctaatagcgaaggtagttatattgttggtggaggttcatctggc
gacatttacttctgggaggttgcttcgggtaggttattaaagaaatggcacgctcattat
agggcagttacatgcttagttttctccgaggatgattcagtcctcatttctgggtcagag
gatggatgtgttagagtttggtcgcttttcatgatatttgataatgttagacagcagcag
gcaagtcatctttatgagtatagttttactgaacatactctgcgaataacggatatcgtt
atgggttatggtggatggaatgcaattattgtgtcggcttctgaggaccgcacgtgtaag
gtatggagcttatccaggggaagattattaagaaatgttgtgtttccttccatcattgat
gcaattgctatagaccctggtgaacatgttttctatgctggcagtcgagatggtaaaatt
tatattgctgcacttaatgctgaaagtcccccaagcaacaattatggattgcacatcatc
ggttcactaactgatcaaagtaagcctgttacttgcttggcatatagtgcagaaggaaat
ttgctattatccggatcagaggatggcatggttcgagtttgggatgtgaaaaccaaaaac
attattcgcatgttccgacattccaaaggccctgtgaacaatattctcattgttagacta
ccataccctttcactcggaccgaatcaaaagtgcaagcttcctcaagaaggcacgaatca
ctccggcctcctctagaaaaatatgcaaattcaagcgatgaagacatggataacaaggct
atcattgcactcccggatacgatagacctcccttcatacctcagttctcagctaatcaat
gatcacgttaaacagcttcagcaacaaggatcttcagccgcggctgaaatggaagtgaag
agactgaagcttgacggccaacgatctatggagatgtttcagcaattgaaaaaagtttat
gacaacttgcaggaattctgcgtcaatgagctcttagatggacaagcaatggaaggatcc
aaagggaactaa

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