Hibiscus syriacus (Rose-of-Sharon): 120202851
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Entry
120202851 CDS
T09559
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120202851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120202851
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
120202851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
120202851
NCBI-ProteinID:
XP_039059141
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MKQMMNLSPTLSMNAPFGGASASNPAASGAPAMKDRKISSAEQLVLDLSSPDLRENALLE
LSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVA
SHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLST
EIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLANMVAAIA
EQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSACLREDHTTRKWLQQLLH
NVGVSRMPTLQAGAGFDHMLVS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaatgatgaatctgtctccaactctatcgatgaacgcgccctttggaggggcc
agcgcctcgaatccagctgcctccggagctccggccatgaaggatcggaagatttcatcg
gcggagcaattggttctcgacctcagcagccctgatctccgagaaaacgctcttctcgaa
ctatccaagaaaagagaattatttcaagatttggctccattgttgtggaattcatttggt
actattgctgcacttttacaggagatagtttctatttaccctgttctctcaccaccaaat
ctaactccagctcagtcaaatcgagtttgcaatgcccttgctctacttcagtgtgtagct
tctcattcagacacaaggatgttattcctaaatgctcatatacccttatatctgtatcct
ttcctcaatacaacaagtaaatcaaggccttttgagtacttgaggcttactagcttaggt
gtcattggtgccttggtgaaggttgatgatacagaagttattagcttccttctttcgaca
gagataattccgctatgcctccgaacaatggagatgggtagtgaactatcaaagacagtt
gctacttttatagttcagaagattctgttagatgatgttggcttggactatatttgcact
actgctgagcggttttttgcagttggtcgagttctggcaaatatggttgcagcaattgct
gagcaaccctcttcacgtcttttaaaacacattattcgatgttatcttcgattgtcagat
aacccaagggcttgtgatgcattgagaagttgccttccagatatgttgcgtgatgccact
tttagtgcatgtcttcgtgaagatcacaccacgaggaagtggctgcaacagttgcttcac
aatgtcggggtgagtcggatgccaacacttcaggccggtgctggatttgatcacatgctg
gttagctga
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