Hibiscus syriacus (Rose-of-Sharon): 120202878
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Entry
120202878 CDS
T09559
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120202878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120202878
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120202878
mRNA degradation factors
5'-3' decay
Decapping complex
120202878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
120202878
NCBI-ProteinID:
XP_039059160
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRIDAFIEEILITAAHVTFYEFNIDSSQWSRKDVEG
SLFVVKRSTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQGPYLLYRNAAQEVNGIWFYNP
RECEKVASLFSRILNAYSKVPTKPKASSSASEFEELEAVPSMSVIEGPLEPPATTSPAID
APQDSSFVNFFSAAMNLGSNAPNSTIPAQPYHSISTTPLSSHAPSAISTLTLAPSMSSPP
LSAQPSLDSVGSGNRVANLVKPSSFFVPPSSSSLMMPPPSSSNPTISTLHPPVIPQRPYG
TPMLQPFPPPTPPASLTPGALPTLHNGSLISRDKVRDALLMLVQDDQFIDMFYQALQKVH
HM
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagactgggaaattgatgccgaatctcgatcaacagagcacgaagatgctcaat
ctcactgttctccaaagaattgatgctttcatagaggagatcctgatcactgctgctcac
gtcaccttctacgaattcaacatcgacagcagtcaatggagtcgaaaagatgttgaagga
tctctctttgttgttaagaggagtactcaacctcggttccagttcattgtaatgaatcgg
cgaaacacagataatttagtggagaatttattgggagattttgagtacgaggttcaaggt
ccatacttgctgtatcgaaatgctgcacaagaagttaatggcatttggttctataatcct
cgtgaatgtgagaaagttgcaagcctctttagtagaatacttaatgcatactcaaaagtt
cctacaaagccaaaagcatcttcaagtgcaagtgaatttgaagaactagaagcagttcct
agcatgtctgtaatcgaaggcccgttggagccaccggcaactacctctcctgctattgat
gcccctcaagattcatcatttgttaacttctttagtgctgctatgaatctcggaagtaat
gctccaaatagtacaataccagcacagccttaccattctatctcgaccacccctctttct
tctcatgcaccatctgccatatcgactcttacacttgctccatcaatgtcatcccctcct
ctttctgctcaaccttcgcttgattcagtaggtagtggtaaccgagtggctaatcttgta
aagccttcttcattttttgtacccccttcctcctcctcattgatgatgccacctccctct
tcatcaaatccaaccatttctactcttcatccacccgtcattccacaacgtccttatggc
actccaatgcttcaaccctttccaccacctactccacctgcatctctcactcctggtgca
ctgcctactttgcacaatggatctctgattagcagggataaagtccgtgatgcactacta
atgcttgttcaggacgatcaattcattgacatgttctatcaggcattgcagaaggtgcat
cacatgtga
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