Hibiscus syriacus (Rose-of-Sharon): 120203440
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Entry
120203440 CDS
T09559
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120203440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120203440
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120203440
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
HECT type E3
120203440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
120203440
NCBI-ProteinID:
XP_039059665
LinkDB
All DBs
Position
Unknown
AA seq
1900 aa
AA seq
DB search
METRSRKRAEASSVAPSSSPSGPTTRSHKRARLSSSSTAATAATTRSPSSRAAATLMDFT
TTESSSGSHRDRRSSKANQTTTSDSPNLASDRGKEKERDPSVRDRDRDKGNRDNNNSNDP
ERNLGLILDTSGGEDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSGMGS
ASSSHQSGRLKKILSGLRADGEEGKQVEALTQLCEMLSIGTEESLSTFSVDLFVPVLVGL
LNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFCARLLTIEYMDLAEQSLQAL
KKISQEHPTTCLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDYVLEAVPL
LTNLLQYHDLKVLEHASVCLTRIADAFASSPDKLDELCNQGLVTQAASLISASSSGGGQA
SLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSNNSSVPPALSRPA
EQIFEIVNLANELLPPLPQGTISIPASSSIFVKGSIVMKSPASSSNKQENTDENAPEVSA
REKLLRDQPELLQQFGVDLLPVLMQIYGSSVNSPVRHKCLSVIGKLMYFSSAEMIQNLLS
VTNISSFLAGVLAWKDPHVLVPSLQIAEILMEKLPGTFSKMFVREGVVHAVDQLILIDNQ
TATPAQLSPPEKDNDSASGTPSRSRRYRQRSGNSKPEGGSVEESKNQASLNIGSPPSTVE
IPTANSNLRTAVSACAKTFKDKYFPSDPGAVEVGVTDDLIHLKGLCMKLNAGVDNQKTKA
KRKSKALGSRLADFSSSKEEYLIDVISEMLAELSKGDGVSTFEFIGSGVVAALLNYFSCG
YFSQERISDANLPKLRHQALKRLKSFIDVALPSSVDQGSIAPMTVLIQKLQNALSSVERF
PVVLSHSSRSSGGGARLSSGLSALSQPFKLRLCRAQGEKSLRDYSSNIVLIDPLASLAAV
EEFLWPRIQRSDTAQKPSASVGNSDSGNTPSGAGASSPSTSTPASATRRHSSRSRSSVNI
GDVAKKESSQEKSTSSSKGKGKAVLRPSQEESRGPQTRNAARRRAALDRDSPIKPENGDS
TSEDEELDMSPVEIDDALVIEDDGISDDEDDDHEDVLRDDSLPVCMPDKVHDVKLSDSAE
DGTPVPATSDNQTNAASGSSSRVAAVSGSDAADFRSGYGSRGAMSFAAAAMAGFGSANGR
GIRGGRDLQGRPPFGSSHEPLKLIFTVGSKQLNRQLTIYQAIQRQLVLDEDDCERYGGSD
FTSSDGRGMWSGIYTITYQRAETQPDRTSVGGSGSSTAPKSIKSCSHDSSSDPQTQRMSL
LDSILQGELPCDLERSNPTYTILTLLYVLEGLNQLAPRLRAQIASDNFAEGKNLNLDELS
TPSSRVPYEEFINGKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFY
STAFGLSRALYHLQQQQGADGHGSTNERVVRVGRLQRQKVRVSRNRILDSAAKVMEMYSS
QKAMLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLGMWRSNSTWDKSTMVIDGDEEKNE
KTAGSVTIGGDVIQAPLGLFPRPWPPNADACEGSQFSKVIEYFRLLGRVMAKALQDGRLL
DLPLSTSFYKLVLGQELDLSDILSIDAEFGKFLQELHFLVCRKQYMESTGGENSSAIADI
RFRGAPIEDLCLDFTLPGFPYYILKPGDETVDINNLEDYISLVVDATVKDGIIRQMEAFR
AGFNQVFDIASLQIFTPQELDYLLCGRRELWEAETLADHIKFDHGYTAKSPAILNLLEIM
GEFTPEHQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSAIPASSNGSGTSGTADDD
LPSVMTCANYLKLPPYSTKEVMYKKLLYAINEGQGSFDLS
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccggaagcgggcggaggcctcctcagttgccccttcatcttctccc
tctggaccaaccactcgttctcataagcgcgcacgtctttcttcctcttctaccgctgca
actgccgccacgactcgctctccctcttcccgcgctgccgctactttaatggacttcacc
accaccgaatcttcttctggttctcaccgcgatcgccgttccagcaaagctaatcagacc
acaacaagtgacagtccgaatctcgcctccgataggggcaaagagaaagaacgtgatcca
agtgttcgtgacagagatagagataagggtaatagagacaataacaattctaacgaccct
gagagaaatttagggttgattttggatacctccggaggcgaagacgatgataatgatagc
gaaggaggtgtaggtattttgcaccagaatctgacgtcagcaagcagcgcgttacaaggc
ttgttgagaaagcttggtgctgggcttgatgatttacttccgtcatcgggtatgggttct
gcatcttcatctcatcaaagcgggaggttgaagaagattctctccgggttgcgtgctgat
ggagaggaagggaaacaagtggaggcgttgacgcagctgtgtgagatgctttcgattggg
actgaagagtccttgagcacgttttctgtggatttatttgttcccgtgctcgttgggttg
cttaatcatgagagtaatcctgatatcatgcttcttgcagcaagggcactgactcattta
tgtgatgttttgccttcctcatgtgctgctgtggtgcactatggtgcagtttcgtgtttt
tgtgctaggttgctcactatagaatatatggacttggctgaacagtctctccaagctttg
aagaagatatctcaggagcacccaaccacctgtttacgagctggtgctctcatggctgtg
ctttcgtacttggatttcttctccactggggttcagcgagtggcactatctactgctgca
aatatgtgcaagaaactcccttcagatgcatctgattatgtcttggaagctgtaccttta
ttaacaaatcttttgcagtaccatgatttgaaggtgctggagcatgcttctgtttgtttg
actcgcattgctgatgcctttgcatcttccccggataaattagatgagctttgcaatcag
ggcctggttactcaagctgcatctctcatttctgcaagttcttctggaggtgggcaggct
tctttgagcacgccgacatatacgggcttaattcgactgctttcaacatgtgcaagtggg
tctcctttaggagcaaaaactttacttctgcttgggatcagtggcatacttaaagatata
ctatcaggttctggcgtttctaataactcatccgttccaccagcattaagcagaccagca
gagcagatttttgaaattgtcaatttggcaaatgaacttcttcctccgttgccacaagga
accatttccatccctgccagctctagtatatttgtcaaaggatctattgtgatgaagtct
cctgctagcagctctaacaagcaagaaaatactgatgaaaatgctcctgaagtttcagcc
cgagagaaattattgagagatcagcccgaacttcttcagcagtttggtgtggatctcctt
cctgttctcatgcagatctatggttccagcgtcaatagccctgttcgccacaaatgtctc
tcagttattggaaaactaatgtactttagcagtgcagagatgattcagaatttattgagt
gtgacaaatatatcaagcttccttgctggtgttttagcatggaaagatccacatgtattg
gttccgtccctccaaattgcagagatcctcatggaaaaacttcctggaaccttctccaaa
atgttcgtcagagagggcgtcgttcatgccgtggaccagctcattttaattgataatcaa
actgccactcctgcccaattatctccccctgagaaggataatgattctgcatctggaaca
ccatcacgttccaggcgctacagacaacgcagtggtaactctaaacctgaaggaggttct
gtggaggagtccaagaatcaggcatctttaaatattggttcacctcctagtacagttgaa
attcctacagccaattccaaccttcgtactgcagtaagtgcatgtgctaaaacatttaaa
gataaatatttcccctctgatcctggagctgttgaagttggtgtaacggatgatcttata
cacttaaaaggtctttgcatgaaattaaatgctggtgttgacaatcaaaagactaaggca
aaaagaaaatccaaagctttggggtctcgtttggctgacttttcttctagcaaagaagag
tatttgattgatgtaatttccgagatgctagctgaactgagcaagggggatggggtatcc
acatttgagtttattggtagtggtgttgttgcagccttgttaaactatttttcttgtggg
tacttctcccaggagaggatttcagatgcaaacctgcctaagcttcgacaccaagctctt
aaaagattaaaatcatttattgatgttgcacttccttcaagtgttgatcaagggagtatc
gctcctatgactgtactgattcagaagcttcaaaatgctttatcgtctgtagagcgtttc
cctgtagttctcagccattcatcgagatcttctggtgggggtgcacgcctctcttctgga
ttaagtgcattatctcagccttttaagttgcggctctgtcgagcccaaggggagaagtct
ctccgtgattattcttcaaatattgtgttgattgacccattagcaagtctagcagctgtg
gaagaatttctttggccacgtattcaacgaagtgacactgctcaaaaaccctctgcatct
gtaggaaattccgactctgggaacacacctagtggggctggtgcttcttcaccatctacc
tcaactcctgcttcagccactcgtcgtcattcttcaaggtccagatcatctgttaatata
ggagatgttgccaaaaaggaatcatcacaggagaaaagcacaagttcatcaaagggcaaa
ggtaaggctgttttgaggccttctcaagaggagtctagaggacctcaaactagaaatgct
gctcgtagaagggctgctctcgatagagattctccaattaaacctgaaaatggtgactcc
acttctgaggatgaagaattggatatgtctcctgtggagattgatgatgctttggtgatt
gaagatgatggtatttctgatgatgaagatgatgatcatgaagatgtgctcagagatgat
tctcttcctgtctgcatgccagataaagtacatgatgttaaattgagtgattcagctgaa
gatggcacacctgtgcctgccacaagtgataaccaaactaatgctgcttctggatctagc
agcagagttgctgctgttagtggttcagacgctgctgattttagaagtggttatggctca
aggggtgcaatgtcgtttgctgcagctgccatggctgggtttggatctgccaacggtaga
ggtattaggggaggtagagatctacaaggacgacctccatttggtagttctcatgagcct
ctaaagttaatttttactgttggcagtaagcagttgaacaggcagttgaccatttatcag
gccattcaaagacagcttgtgttggacgaggatgattgtgaaagatatggtggtagtgat
ttcacatctagtgatggaagagggatgtggagtggtatctacacaataacatatcagagg
gcagaaacccaacctgaccgaacatcagtagggggttctggttcttctacagcgcctaag
tctattaaatcttgttctcacgattccagttcggatccccagactcagaggatgtcactg
ttagatagcatcttgcaaggggaacttccttgtgatcttgaaagatctaatcctacttat
actatcctgacactgttgtatgtgttggaggggttgaatcagctggcacctcgtttgaga
gctcagatagcttctgacaattttgctgaaggaaaaaatttaaatctggatgagttgagt
acccccagttctagagtgccttatgaggaatttattaacggtaagctcacaccaaaactt
gctcgacaaatacaggatgcccttgctctatgcagtggaagccttccttcctggtgttat
cagctgacgaaggcatgcccctttttatttccttttgagacacgaagacagtacttctat
tcaactgcctttgggttgtctcgtgcattatatcatctgcagcagcagcagggagctgat
ggccatggatcaactaatgaaagagtggtaagggttgggagattacagcggcagaaagtt
cgtgtctctcgcaaccgcattttggattctgctgcaaaagtaatggagatgtattctagc
caaaaagccatgcttgaagttgaatattttggagaagttggcactggattgggtccaacc
ttggagttctatacactattaagtcatgatttgcaaaaggttggtcttggaatgtggagg
tctaattctacatgggataagtcaacaatggtaattgatggagatgaagagaaaaatgaa
aaaactgccggttctgttactattgggggagatgtaatccaagctcctctggggttgttc
cctcgaccttggccaccaaatgctgatgcttgtgaaggaagccagttttccaaagtaatt
gaatatttccggctacttggacgtgtgatggccaaagctcttcaggatggacgacttcta
gacctgcctctatcaacatcattttataaacttgtgcttggtcaagagcttgatttgtct
gatattctgtctattgacgccgagtttgggaaatttttgcaagaactgcatttccttgtt
tgtcgaaagcagtacatggaatcaacaggtggtgaaaatagttccgcaattgccgatata
cgcttccgtggggccccaatagaagatctctgtttggattttacacttccaggctttcca
tattacatactgaaaccaggggatgaaactgtggatatcaataacttagaagactacata
tccttggtggttgatgcaactgtcaaggatggaattattcggcaaatggaagcatttcgg
gctggatttaatcaggtttttgatattgcatcattgcaaatatttaccccacaagagttg
gactatttgctgtgtggtcgcagagagctgtgggaggctgagacacttgctgatcacata
aaattcgatcatggatatactgcaaagagccctgctattcttaatttacttgaaattatg
ggagaatttacaccagagcatcaacgggcattctgccaatttgttaccggtgcgcctaga
cttccacctggtggtctggcagtgctgaatccaaagctaacaattgttagaaagcattcc
tcttctgcaattcctgcttcttccaatggaagtggaacctcaggaacagcagatgatgac
ttgcccagtgtcatgacttgcgctaattacttgaagcttccgccatattcaaccaaggaa
gttatgtacaagaaattgctttatgcaatcaatgagggacaaggatcttttgatttatcg
tga
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