Hibiscus syriacus (Rose-of-Sharon): 120203616
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Entry
120203616 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: beta-adaptin-like protein C
KO
K12392
AP-1 complex subunit beta-1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120203616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120203616
Membrane trafficking [BR:
hsyr04131
]
Endosome - Golgi transport
Others
AP-1 complex
120203616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
Cnd3
Arm_2
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
120203616
NCBI-ProteinID:
XP_039059786
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MSGHDSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLESLKDLISDNNPMVVA
NAVAALAEIQENSSGPIFEITTPMLTKLLTALNECTEWGQVFILDALSRYKAADAREAEN
IVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQRRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLDRAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLESFPEEPPQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLAEKPVISDDSNQLDSSLLDELLANIATLSSVYHKPPEAFVTRTKTATPKTEDDEYPD
GNDTTRYSETLSNAVNGGASPPTSSSSVPNAAAWQPAPAPAPVPDLLGDLIGIDNNQIVP
ADQHATSAGPPLPVLLPASTGQGLQISAQLVRQDGQIFYSLLFENNTQITIDGFMIQFNK
NSFGLAAAGPLQVSGLAPGESARTLLPMVLFQNMSPGPPNSLLQVAVKNSQQPVWYFNDK
IPLHVFFTEDGRIERTSFLETWRSLPDSNEVLKEFPGMXVTSAEATLDRLAASNMFFIAK
RKHANQDVFYFSAKIPRGIPFLIELTMIIGSPGVKCAVKTPNPEMAPLFFESIETFLMA
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcacgattctaagtacttctcgacgacgaagaagggagaaatccctgaactc
aaggaagagctcaattcccagtataaggataaaagaaaagatgctgtaaagaaggttatt
gctgcaatgacggttggtaaggatgtgtcatcgctgttcacagacgtggtgaactgcatg
caaacagagaatttggagctgaaaaagcttgtttatttgtatcttataaattatgctaaa
agccagcccgaccttgctattcttgcagtaaatacatttgtaaaggattcacaggatcca
aatcctctcattcgtgctttggctgttcggactatgggatgcatccgtgttgataagatc
acggaatatctttgtgatccccttcagaggtgcctcaaggacgatgacccctatgtccgc
aagactgctgccatatgtgttgctaaactttatgatataaatgctgagttggttgaggat
aggggttttctggaatctctcaaggatttgatatctgacaacaacccaatggttgtagct
aatgctgtggcagctcttgctgagatacaagagaatagtagtggaccaatatttgaaatc
acaacccccatgcttacaaagctccttactgctcttaatgaatgcacagagtggggtcaa
gtttttatacttgatgctctctcccgatataaggcagctgatgctcgtgaagcagaaaat
attgtggaaagagttacaccacgacttcaacatgctaattgtgctgttgtactttcagct
gttaagatgattcttcaacaaatggaacttatcactagcactgatgttgttcgaaatctt
tgcaaaaagatggctcctcctcttgtgacattactctctgcagaacccgagatacaatat
gttgcattgcggaatatcaacctcatagtacaaaggcggcctacaattcttgcccatgaa
atcaaggtattcttctgcaagtacaatgatcccatttatgtgaagatggagaagttagaa
atcatgataaagcttgcttccgaccgaaatatagaccaggttttattggagttcaaagaa
tatgcaacagaagtagatgtagattttgttagaaaggctgttcgtgccatcggtcgatgt
gctatcaagttagacagagcagctgaacggtgcattagtgttctgcttgagttgatcaag
attaaagtgaactatgttgttcaagaggctattatagttatcaaagatatatttagaaga
tatcctaacacgtatgaatctatcattgcaaccctttgtgagagcttggacaccttagat
gagccagaagctaaggcatcaatgatatggataattggagaatatgccgaaagaattgac
aatgctgatgagctccttgaaagcttcttggagagtttccctgaagaacctccccaagtt
caactgcagctgctaactgcgacagtcaaactctttcttaagaagccaacagaaggccca
cagcagatgattcaggttgtattgaataatgctacggtggaaactgacaatcctgattta
cgggaccgtgcgtacatttattggcgccttctatcaactgatcccgaggctgctaaggat
gttgtgttagctgagaaacctgtgatcagtgatgattcaaaccaactagattcatccctt
cttgatgagcttcttgccaacattgctacactatcttctgtctatcacaaacctcctgag
gcttttgtaactcgcacaaagactgcaactccaaaaactgaagatgatgagtaccctgat
ggaaatgatactactaggtattctgaaacactttctaatgctgttaatggtggtgcatca
ccaccaaccagttcaagtagcgtcccaaatgctgcagcttggcagccagctcctgcacct
gctcctgtgcctgatctgttaggtgatctgattggtattgataacaatcaaattgtcccc
gctgatcagcatgccacatctgctggcccccctttgcctgttttgttgccagcatcaact
ggacagggtttgcaaatcagtgcacagttagttcgacaggatggtcaaatattttacagt
ttgctgtttgagaataacacacagatcactattgatggattcatgattcagtttaacaag
aattcatttggtctggcagctgcgggacctcttcaggtttccgggttggcaccgggagaa
tcagcaagaacattgctgccaatggtattgttccagaatatgtctcctggtcctccaaac
tcccttctgcaggttgctgttaaaaatagtcagcaaccagtttggtacttcaatgataaa
atcccgttgcacgtgttctttactgaggatgggaggatagagcgaactagttttcttgag
acatggagatcactaccagattcgaatgaggtcctaaaagaattcccaggcatgntggtg
accagtgctgaagctacccttgaccggctagctgcttcaaacatgttcttcatagcaaaa
cgtaagcatgccaaccaggacgtattctacttctcagccaagatccctcgaggtatacct
ttcttgattgaacttacaatgataatcggaagcccgggtgtgaagtgcgcagtgaagacc
ccaaatcctgagatggcaccactgttttttgaatccattgagacattcctcatggcatga
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