Hibiscus syriacus (Rose-of-Sharon): 120204212
Help
Entry
120204212 CDS
T09559
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120204212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120204212
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120204212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
zf-C3HC4_3
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
120204212
NCBI-ProteinID:
XP_039060262
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MSFDLMLKPTCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN
VRASPATEKTYFIGRFMTGLPNFSKKKNAENRWSMQKDGLQGRQLTDAMREKYKNKPWLL
EDETGQAQYQGQREGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKESTAGGGKGRKKSAGEEEEGHVSDKG
EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG
NDPEERDLAPEVPAPPEIKEDEDEEDEEQEGGGLSKSGKELKKLLGKASGLNESDAEDDD
DDDDDDDDDVEDTNFNPVPAPKQKDAPKEESANSPVKPAPAASARGTPAASKSSKGKRKA
SGDDTKGSNGTPVKKVKSEPDSKASVKEENRTASKGSVPSKGTSSSAKAGSTSAAGGSSS
KAGSASAAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKTPEDKKAFADILRRISKIQK
TNGPNNYVVLREK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgatctgatgctgaagccgacatgcagcggctgcgggtcttcccaagatttg
tacggcagcaactgcaagcacatgaccctgtgcgtctcttgtggcaaaaccatggccgag
aaccaaggcaaatgcttcgaatgtggcgccattgtcacacgcttgattcgagaatacaat
gttagagcaagtcctgccaccgagaagacctactttattggtaggttcatgactgggttg
cccaatttttcaaagaagaaaaatgctgagaatagatggtctatgcaaaaagatggatta
caaggacgccaacttaccgatgctatgcgggagaaatataagaacaagccttggttattg
gaggatgaaacaggtcaggctcagtatcaaggtcaacgtgaaggttcacagtctgcaact
tattacctgcttatgatgcaaggaaaggaatttgtagctattccagctggttcttggtac
aattttaacaaggttgcacaatataaacaacttacactggaagaagcggaagaaaaaatg
aagaacaggaggaagactgcagatggatatgagagatggatgatgaaagctgcaaataat
ggtgctgctgcatttggtgaagtggaaaagattgatgaaaaagagagtactgctggtggg
gggaagggacgcaaaaagtctgctggtgaggaggaggaaggccatgtatcagataaagga
gaagaggacgaagaagaggaagcagccaggaagaataggcttggactcaacaaaaaaagt
ggtgatgatgatgaagaaggtccaaggggaggtgatcttgatatggatgatgacgatatt
gagaagggtgatgattgggagcatgaagaaatattcactgatgatgatgaagctgttggt
aatgatcctgaggaaagggatttggctcctgaagttcctgctcctccggaaatcaaggag
gatgaagatgaggaggatgaagagcaggaaggaggaggactgagtaagtctgggaaagag
ttgaagaaactattaggcaaagctagcgggcttaacgaatcagatgcagaagatgatgat
gacgacgacgacgacgatgatgatgatgtggaagatacgaactttaatcctgtaccagct
cctaaacagaaggatgcacctaaagaagaatctgctaacagtccagtgaaacctgcacct
gcagcttctgctcggggaaccccagctgcatcaaagtcatcaaagggaaagagaaaagcc
agtggtgatgatacaaaaggatctaatggtacccctgtgaagaaggttaaatcagaacct
gactcgaaagcttctgtgaaagaggagaatagaactgcttccaaaggcagtgttccttcc
aaaggtacatcatcttctgcgaaagctggatcaacatcagctgccggtggatcatcttca
aaagcaggttcagcatcagctgctggacctgtaactgaagaagaaatcagagcggtgtta
ttacaaaaggcacctgtaacaacatccgatcttgtggctaaatttaaagctaggctaaaa
actccggaggacaagaaggcttttgcagacattctccggcgaatttctaagatacaaaag
acgaacgggccgaataactatgtcgtgttgagagaaaagtaa
DBGET
integrated database retrieval system
