Hibiscus syriacus (Rose-of-Sharon): 120204329
Help
Entry
120204329 CDS
T09559
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120204329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120204329
03110 Chaperones and folding catalysts [BR:
hsyr03110
]
120204329
03029 Mitochondrial biogenesis [BR:
hsyr03029
]
120204329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120204329
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120204329
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120204329
Chaperones and folding catalysts [BR:
hsyr03110
]
Heat shock proteins
HSP60 / Chaperonin
120204329
Mitochondrial biogenesis [BR:
hsyr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120204329
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120204329
Exosomal proteins of other body fluids (saliva and urine)
120204329
Exosomal proteins of breast cancer cells
120204329
Exosomal proteins of colorectal cancer cells
120204329
Exosomal proteins of bladder cancer cells
120204329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120204329
NCBI-ProteinID:
XP_039060358
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MYRFASSLSSKARLAKSNAQLIGNRLSWSRNYAAKDIRFGVEARALMLRGVEELADAVKV
TMGPKGRNVVLEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFVEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQNCELENPLILIHEKKISNLSALVKFLELSLTKQRPLLIVAEDLESEALATLILNKLRA
GLKVCAIKAPGFGENRKAGLQDLAALTGGQVVTEDLGLDIEKVGAEVLGSCKKVTVSKDD
TIFLDGAGDKAAIEERCEQIRSSMELSTSDYDKDKLQERLAKLSGGVAVLKIGGASEVEV
GEKKDRVTDALNATKAAVEEGIVPGGGAALLYASKELENMDTENFDQKIGVQIIQNALKM
PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVTEAPKDEKEGTTTPGGMGGLDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgcctcttccctttcctccaaagctaggttggctaagagcaatgcccaa
ttgattgggaataggttgagttggagcagaaactatgcggctaaagacattagatttggt
gtagaagcacgcgccttgatgcttaggggcgttgaagagctggccgacgccgttaaagtc
accatgggtccaaaagggcgtaatgttgttttggaacaaagttttggagcccctaaggtg
acaaaagatggtgttactgtagccaagagcattgaatttaaagacaaagttaaaaacatc
ggcgcatctcttgtaaagcaggttgcaaatgccactaatgatgttgctggggatggaacc
acttgtgcaacagtgctcacccgggcaatatttgttgaaggttgcaagtcagtagccgct
ggaatgaatgccatggaccttagacggggaattacaatggcagttgatgcagttgtgaca
aatttgaagagcagagcacggatgatcagcacatctgaggaaattgcacaggttggaaca
atatctgcaaatggagaaagggagattggagagctcattgccaaggctatggagaaagtt
ggaaaagaaggtgttattaccattgctgatgggaaaaccttgtacaatgaattggaggtt
gttgagggaatgaagcttgacaggggctacatatccccttactttatcactaaccagaag
aaccaaaattgtgaattggagaatccactcattttgatccatgagaagaagatctcaaat
ttgtctgctttggttaaatttttggaattgtccttgacaaagcaaaggcctttactaatt
gttgctgaagatcttgaaagtgaagcacttgcaacactcattctgaacaagcttcgtgct
ggcctcaaggtgtgtgctattaaggcaccaggttttggagaaaataggaaagctggtttg
caggaccttgcggctctcacaggaggccaagtagtaactgaagaccttggtctcgacatt
gaaaaggtgggagcagaggtgctaggctcttgcaaaaaggttacagtatcaaaggatgac
acaattttccttgatggagctggcgacaaagctgctattgaagaaagatgcgaacaaata
agatcttctatggaactaagtacttctgattatgataaagataagttacaagaacggctt
gcaaagctttctggtggtgttgcagttttgaagattggaggagcaagtgaagtagaagtt
ggtgaaaagaaggatagagttaccgatgccctaaatgctaccaaagctgccgtggaagaa
ggaattgttcctggtggtggcgctgcccttctttatgcatcaaaggagcttgaaaacatg
gacactgaaaatttcgatcagaagattggtgtgcagatcatccagaatgctcttaagatg
cctgtgcatacaattgcttccaatgctggggttgagggagcggtggttgttggaaagcta
ctggaacaggataaccctgacctaggatacgatgctgctaaaggtgaatatgtagacatg
gtaaaagcaggaatcatcgatcctttgaaagtcataagaacagccttggtagatgctgca
agtgtgtcttctttgatgaccacaacagaagcaatcgttactgaagctccgaaggatgaa
aaggaaggaaccacaacccctggtggcatgggcggcctagattactag
DBGET
integrated database retrieval system
