Hibiscus syriacus (Rose-of-Sharon): 120204378
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Entry
120204378 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120204378
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120204378
04147 Exosome [BR:
hsyr04147
]
120204378
04090 CD molecules [BR:
hsyr04090
]
120204378
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120204378
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120204378
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120204378
CD molecules [BR:
hsyr04090
]
Proteins
120204378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
Zeta_toxin
AAA_16
RsgA_GTPase
DUF87
AAA_21
AAA_15
nSTAND1
AAA_19
APS_kinase
Motif
Other DBs
NCBI-GeneID:
120204378
NCBI-ProteinID:
XP_039060409
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MTPPGSLSGNQDDENDTSKKKSGGKQQQNVPLLKLFSFADCYDYVLMALGSLGACVHGAS
VPVFFIFFGXLINIIGMAYLFPKEASHKVAKYSLDFVYLSAAILFSSWIEVACWMHTGER
QAAKMRMAYLKSMLNQDITLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFI
AGFSIGFARVWQISLVTLSIVPLIALAGGIYAYVATGLIARVRNSYVKAGEIAEEVIGNV
RTVQAFAGEEKAVKSYKEALMNTYKYGRRAGLTKGLGLGSLHCVLFVSWALLVWFTSIVV
HKNIANGGDSFTTMLNVVISGLSLGQAAPDITAFIRARAAAYPIFEMIERNTVSKTSSKT
GRKLGKVEGHIELKDVSFSYPSRPDVSIFNRFCLNIPAGKIVALVGGSGSGKSTVISLIE
RFYEPLAGEILLDGNNIKNLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATFEEIT
RAAKLSEAITFVNNLPDRFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSAL
DAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQSGKIVETGTHDELISKPNS
AYSSLVQLQETSPLQRYPSQGPTLSRPLSLSYSRELSRTRTSFGASFRSEKDSISRAGAD
AIDAGKATYVSPGRLYSMIGPDWYYGVFGTITALIAGAQMPLFALGVSQALVAYYMDWET
TCREVKKIAILFCCGAVITVIVHAIEHLCFGIMGERLTLRVREVMFSAILKNEIGWFDDL
NNASSMLASRLETDATFLRGVVVDRTSILIQNVGLVIAAFIIAFILNWRITLVVLATYPL
IISGHISEKLFMQGYGGNLSKAYLKANMLAGEAVSNMRTVAAFCAEEKILDLYSRELVEP
SKRSFKRGQIAGIFYGVSQFFIFSSYGLALWYGSTLMGKELATFKSVMKSFMVLIVTALA
MGETLALVPDLLKGNQMVASVFEIMDRKTQVVGDVGEELSSVEGTIELRGVNFSYPSRPD
VVIFKEFDLKVRSGKSMALVGQSGSGKSSVLALILRFYDPTSGNVMIDGRDIKKLRLKSL
RKHIGLVQQEPALFATSIYENILYGKEGASESEVIEAAKLANAHTFISSLPQGYSTKVGE
RGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMRNRTTVMVA
HRLSTIKNADRISVIQGGRIIEQGTHSSLVENKNGPYYKLINLQQQQLEQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgacacctccgggttcattatccggcaaccaagatgacgaaaacgacacgagcaagaag
aaatcgggagggaagcagcagcagaatgttccattgttgaagctgttttcgtttgccgat
tgttacgattacgtgctcatggctctgggatcactcggtgcatgcgtgcatggcgcttcg
gtcccagttttcttcatcttcttcgganaactgatcaacattataggcatggcttacctc
ttccccaaagaagcttctcataaagttgcaaaatactcgttggattttgtatatctcagt
gcggctattctgttctcctcatggatagaggtggcttgctggatgcacaccggtgagcgg
caagcggcgaaaatgaggatggcatatctaaagtctatgctaaatcaagatataacctta
tttgacaccgaagcttcaaccggcgaagtcatatctgcaattacaagtgacattattgtt
gttcaagatgccctttccgagaaggttgggaatttcatgcattacataagcagattcata
gcaggtttcagtattggctttgctagagtatggcaaatcagcctggtaacactctcaatc
gttccattgatagcccttgccggtggcatttatgcatatgttgccacgggcctcattgct
agagttcggaactcatatgtcaaagccggtgaaattgctgaagaggtgattggtaatgtg
agaacagtccaagcatttgcaggggaagaaaaggccgtgaaatcatacaaggaagcgttg
atgaatacgtacaagtatggtagaagagctggcttaaccaagggtctagggctcggctca
ctgcattgtgtgctttttgtttcttgggcattgctcgtttggttcaccagtatagttgtt
cataagaacattgcgaacggtggggattcatttactaccatgcttaatgttgtcatctct
ggcctgtcgttaggacaggcggcgccggacatcactgcgtttattcgagcaagggcggct
gcctatcccatattcgagatgatcgagaggaatacagttagcaaaaccagctccaaaact
ggtcgtaaactaggcaaagtggagggccacattgaactaaaggatgtatctttcagttat
ccatctcgccccgatgtaagtatcttcaataggttctgcctcaacatacccgctggaaag
attgtggcacttgtaggaggaagcgggtcggggaagagcacggtcatatcgttgatcgaa
agattttatgagccacttgctggggaaatattgttggatgggaataatatcaagaacctt
gaccttaaatggcttagacaacagatcggtttggttaatcaggagcctgctcttttcgca
acaaccattagggaaaacattctgtatggaaaagatgatgctacttttgaggaaataaca
cgtgccgcaaaactttccgaggccattacctttgttaataatctccctgataggtttgag
actcaggttggtgaacgaggaatacaactatcaggtggacagaagcaaagaattgcgata
tctcgggccatagtgaagaatccatcgattcttttgcttgatgaagcaacaagcgccctc
gatgcagaatctgagaagagtgtacaggaggcgcttgatcgtgtgatggtgggacgaacg
acagtggtggtagctcaccggctttctactattaggaatgcagatgtgattgctgttgtt
caaagtgggaagattgttgaaactggcactcacgatgagcttatttcgaaaccgaacagt
gcctattcttcactcgttcagcttcaagagacatcacctttgcaacgctacccctcacaa
ggtcctactttgagtaggccactcagcttgagttattcaagagaactatcccgaactagg
actagctttggtgcaagttttcgttctgaaaaggactcaattagccgtgctggtgctgat
gcaattgatgcagggaaggcaacttacgtttcacctggaagactgtattccatgatagga
cctgactggtactatggggtctttggtaccattactgcattgattgctggagctcagatg
cctctatttgctcttggggtttctcaagctcttgtagcctattacatggactgggagaca
acgtgccgtgaagtcaagaaaatcgccatcctgttctgttgtggtgcggttataacagtc
attgttcatgcaatcgagcacctctgtttcggtatcatgggagagcgactcactcttcgt
gtgcgtgaagtgatgttttctgccattttgaagaacgagatcggttggttcgatgaccta
aacaatgcaagttccatgcttgcatcgcgcctagaaacagatgcaactttcttaagaggt
gtagtcgtcgaccggacatcgattctcattcagaatgtaggcctggtgatagcagccttc
ataattgcattcatcttaaactggagaatcacacttgttgtcttggccacttatccgttg
atcataagcggtcacattagcgagaaactcttcatgcaaggctatggtggtaacttgagc
aaagcatatctaaaagcaaacatgcttgccggtgaggctgtcagtaatatgcgtaccgtt
gctgcgttctgtgccgaggaaaagatcctcgatctctattcccgtgagctcgtagagcct
tcgaagcgttcatttaagcgtggacaaattgcagggatattctatggcgtttcgcagttc
ttcatcttctcatcttatggccttgccttatggtatggttctactttaatggggaaggag
ctagctaccttcaaatcggtcatgaaatcgtttatggttttgattgtaacggcattagcc
atgggagaaactctggcactggtcccagaccttctgaaagggaaccaaatggtggcatcc
gtgttcgagatcatggaccggaagacgcaggttgtcggggatgtcggagaagaactaagt
agcgtggaaggcaccattgagctaaggggcgttaactttagctatccatcaagaccagac
gtggtcattttcaaggaatttgatctgaaagtacgttcaggcaagagtatggcacttgtg
gggcaaagcggctccggtaagagctcggttctcgctcttatacttcggttctacgatcca
acatccgggaacgtgatgattgatggtagagacatcaagaaactgaggctgaaatccctt
aggaaacacattggattagtccaacaagaaccggctcttttcgccacatcgatatacgaa
aacatcctatacggcaaagaaggagcttcggaatccgaagtaatcgaagctgccaaactt
gctaatgcacatactttcataagttccctccctcaaggctactccaccaaagtcggtgaa
cgaggggtgcaactctccggcggtcagaaacagagagtagccatcgctcgagccgtcctc
aagaaccctgaaatcttgctgctcgacgaagccaccagcgctctcgacgtagagtcggag
cgcgtggtgcagcaagctctagaccggctgatgaggaatcgaacgacggtgatggtggcg
cataggctgtcgactattaaaaacgcggatcggatatcagtcatacaaggaggacggata
atcgagcaagggacgcattcgagcctagtcgaaaacaaaaacggaccgtactataagttg
atcaaccttcagcagcagcagctggaacaatag
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integrated database retrieval system
