Hibiscus syriacus (Rose-of-Sharon): 120204426
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Entry
120204426 CDS
T09559
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120204426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
120204426
NCBI-ProteinID:
XP_039060452
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MASGSRTVHSHDRQQQQQPQSSGISNMRAPHAHHQADSVSKAIAQYTVDARLHAVFEQSG
ESGKSFDYSQSVRTNTPSVPEQQIPAYLSRIQRGGHIQPFGCMIAVDEPSFCLIAYSENA
REMLGITPQSVPNLEKIEVLAIGTDVRTLFTPSGAVLLEKAFAAREITLLNPVWVHSKNS
GKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISELQSLPGGDIKLLC
DTVVESVRQLTGYHRVMVYKFHEDEHGEVVAESKRPDLDPYIGLHYPATDIPQTSRFLFK
QNRVRMIVDCHATPVLVVQDDGLMQPLCLVGSTLRAPHGCHAQYMANMGSIASLAMVVII
NGNDEEASGGRNPMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFALQLNMELQLAAQMS
EKRVLRTQTLLCDMLLRDSPTGIVNQSPSIIDLVKCDGAALYYHGKCYPLGVTPTEAQIK
DIVEWLLAFHGDSTGLSTDSLSDAGYLGAASLGDAVCGMAVAYITKRDFLFWFRSHTEKE
IKWGGAKHHPEDKDDGQRMHPRTSFKAFLEVVKNRSFPWENAEMDAIHSLQLILRDSFKD
AEASNSKAVVHAQIGDLELQGVDELSSVAREMVRLIETATAPIFAVDVEGRINGWNEKVA
ELTGLSVEEAMEKSLVYDLVYKDYQETVDRLLSHALQGEEDKNVEIKLRTFGLEDREKAI
YVVVNACSSKDYTNNIVGVCFVGQDVTGQKAVMDKFIHIQGDYKAIVHSPNPLIPPIFVS
DENTCCLEWNTAMEKLTGWLRGEVIGKMLLGDVFGSCCRLKGPDALTKFMIVLHSAIGGQ
EEDKFPFAFFDRNGKFVQALLTANKRVNMDGQIVGAFCFLQIATPELQQALRVQRQQEKK
CLSMMKELTYICQGIKSPLNGIRFTTSLLEATELTEDQKQFLETSVACEKQMLKIIRDVD
LESIEEGYVELEKAEFSLGGVINAVVSQVMLLLRERNLQLIRDIPEEIKTLSVYGDQARI
QQVLAGFLLNMVLYAPSDDGWVEIHVRPTMKQISDGITIVHTEFRMVCPGEGLPPELVQD
MFHSSRWVTQEGIGLSMSRKILKLMNGEVQYVRESERCYFLIILELPAPRRGSKSDD
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggcagcagaacagttcattcccatgatcgtcaacagcagcaacaacctcag
tcttcaggcataagcaacatgagagcaccccatgcccatcaccaagccgattcagtaagc
aaagccattgctcagtacactgtcgatgctcgtctccacgctgtgttcgagcagtcgggt
gaatcaggcaagtctttcgattactcccagtcggtgagaactaataccccatcggtcccc
gagcagcaaatccccgcttacttgtctagaatccagaggggcggtcacatccagccgttc
ggctgcatgatcgccgtcgacgaacccagtttctgtctcatcgcttacagcgagaacgca
cgtgagatgctcgggattactcctcagtcggttcccaatttggagaagatcgaggttctg
gccatcgggaccgacgtccgtacgcttttcactccttccggcgccgttttgttggagaaa
gccttcgcggcccgcgaaattacgttgctgaacccggtttgggttcactccaagaattcg
gggaagcccttttacgctattttacataggattgatgttggaattgtgattgatttagag
cctgctagaactgaggaccctgctttgtcgattgccggggctgtccagtctcagaaattg
gccgtgcgggcgatttccgagctgcagtcgctccccggtggcgatattaagcttttgtgt
gacacggttgtggagagtgtgagacagcttactggatatcatagggtaatggtgtataaa
tttcatgaggatgagcatggggaggtcgtggctgagagtaaacggccggacttggaccct
tacataggcttacattacccggcgacggatattccgcagacctcaaggtttttgtttaag
cagaatagagttaggatgatagtggattgccatgccacgccggttcttgtggttcaggat
gatgggttaatgcaaccattgtgcttggttggttccactcttcgagcccctcatggttgc
catgctcagtatatggctaatatggggtcgattgcttctttggcaatggtggttattatc
aacggaaatgacgaggaagcttcaggggggagaaatccgatgaggctctggggtctggtt
gtttgtcatcatacttctgctcgttgcattccctttcctcttcggtatgcttgtgagttc
ctaatgcaagcgtttgcacttcaattgaatatggaattgcaattggcagcacaaatgtcg
gagaagcgtgttttaaggactcaaactcttttgtgtgacatgcttcttcgtgactctcca
actggtattgttaatcaaagtcccagcattatcgatcttgtgaaatgtgatggagctgct
ctttattatcatgggaaatgttacccattaggtgtgaccccgactgaggcccaaataaaa
gatatagttgagtggctgttggcattccatggagactcgactggtctaagcaccgacagt
ttgtccgatgccggttaccttggggcagcctcacttggggatgcagtttgtgggatggct
gttgcttatattactaaaagggattttctattctggttccggtctcatacagagaaagag
atcaaatggggtggtgcaaagcatcatccggaggacaaggatgatggacagagaatgcac
ccacggacttcatttaaggcatttctggaagtggtcaaaaatcggagtttcccgtgggag
aatgctgaaatggatgctattcactctcttcagcttatattgcgcgactcgttcaaggat
gcggaagcaagtaattctaaagctgttgtacatgctcagattggggatctagagcttcaa
ggagtggatgagctcagttcagtcgcaagggaaatggtgaggttaatagagactgcaact
gctcccatattcgccgtagatgttgaaggccgcattaatggttggaatgaaaaagttgca
gaattgacaggactgtcagttgaggaagcaatggagaagtctttggtttatgatcttgtt
tacaaggattatcaagaaactgtcgacaggcttcttagtcatgctttgcaaggtgaagaa
gataaaaatgtagagataaaattgcggacttttggcttagaagatcgggaaaaggctata
tatgtggttgtcaatgcttgctctagtaaggattacaccaataatatagttggagtttgc
tttgttggtcaggatgtgactggtcaaaaagcggtgatggacaaattcatccacatacaa
ggtgattacaaggccattgttcatagtcccaatccgttgatcccaccaatttttgtgtcg
gatgaaaacacatgttgcttggagtggaacactgccatggaaaagctcaccgggtggctt
cgaggggaagtcatagggaaaatgttgcttggtgacgtttttggtagttgctgtcgcctc
aagggtccagatgctttgacgaaattcatgattgttttacacagtgccattggagggcag
gaggaagataagttccctttcgcctttttcgaccggaatgggaaatttgtccaggcgctc
ttgacggcaaacaaaagagtcaacatggatggccagatcgtaggagccttttgcttcctg
cagattgcaactcctgaactgcagcaagcattgagagtccaaaggcaacaagagaaaaag
tgcttatccatgatgaaagagttaacctacatttgccagggaataaagagtcctttgaac
ggaatccgcttcacgacctcacttttggaagctacagagctgactgaagaccaaaagcag
tttcttgagactagtgttgcttgtgagaagcaaatgttgaagattatcagagatgtcgat
ctggagagcattgaggaaggttatgtggagcttgaaaaggctgaattttcccttgggggt
gtcataaatgccgttgttagccaagtaatgctactgctgagggaaagaaatttgcagtta
attcgagatattcccgaggagatcaaaacattgtctgtttatggtgatcaagcaaggatt
caacaagtattggccggttttttgttgaatatggtgctttatgcgccatcggatgatggt
tgggtagagattcatgttcgtccaactatgaagcaaatttctgatggaatcactattgtt
cataccgaattcaggatggtatgccccggtgaaggccttcctcccgaattggttcaagac
atgttccatagcagtcgatgggtgacacaggaggggatagggttgagcatgagcaggaaa
atcttgaagctcatgaatggcgaggtccaatatgtcagagagtcggaaagatgttatttc
ttaattatcctcgaacttcctgcacctcggagaggctcaaagagcgatgattag
DBGET
integrated database retrieval system