Hibiscus syriacus (Rose-of-Sharon): 120204594
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Entry
120204594 CDS
T09559
Name
(RefSeq) cyclin-dependent kinase D-3-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
hsyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120204594
09124 Replication and repair
03420 Nucleotide excision repair
120204594
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsyr01001
]
120204594
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120204594
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120204594
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120204594
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120204594
2.7.11.23 [RNA-polymerase]-subunit kinase
120204594
Protein kinases [BR:
hsyr01001
]
Serine/threonine kinases: CMGC group
CDK family
120204594
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120204594
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
120204594
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120204594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
120204594
NCBI-ProteinID:
XP_039060586
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MTETDPSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELTDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYIQMT
LKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGAGVDVWAAACIFAELLLRRPFLQGTSDIDQLGKIFAAFGTPTYSQWPDMI
YLPDYVEYQYVPAPPLRSLFPMASDDALDLLSKMFTYDPKARITTQQALEHRYFSSAPLP
TDPAKLPRPTPKSRPSDVNPQDGPTVLSPPRKSRRVMPDRNSNQLEKIDEHVGVRLAAGE
PSGKSEQVPMSVDFSIFGSKPLSRPTINSADRSHLKRKLDLEFQHND
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacggatccgtcgaagaaagtggcggatagatacttgaagcgcgaggttctt
ggtgaaggtacttatggtgttgtctacaaagccattgatactaagacaggacagacagtt
gccattaagaaaattcggcttgggaagcagaaagaaggggtgaattttactgcactcaga
gaaattaaacttcttaaggagcttaaagatccaaatataattgagttaacagatgcattc
ccgcacaagggtaatttgcatcttgtgtttgagtttatggagaccgaccttgaagctgtt
attcgagatcgaaatatattcctctcaccagctgacatcaaatcctacattcagatgact
ttgaaagggcttgctttttgccacaagaaatgggttttacacagggacatgaagcctaat
aatttgctaataggatccaatggacaacttaaacttgcagatttcggtttagcacgcata
tttggcagcccagatcgtaggtttactcaccaggtctttgctcgatggtacagagctcct
gaattactttttggtaccaagcaatatggtgctggtgtggatgtttgggctgctgcctgt
atatttgctgaacttctcctccgacgaccatttctgcagggtacaagtgacatcgatcag
ttaggaaagatctttgcagcctttggaacaccgacatactctcagtggccagatatgata
tacctgcctgattatgtagaataccaatatgttcccgcaccacctttacgttcattgttt
ccgatggccagtgatgatgctttagatctgttgtcaaaaatgtttacatatgacccaaaa
gctaggattacaactcagcaagcattagagcacaggtacttttcatctgcacctctacct
acggatccagctaagctccctaggcctactcctaaatcacgcccgtcagatgttaatccc
caggatggtcccaccgtgctttctccaccacgaaaatcaaggagagtaatgccagatcgt
aattccaaccaactggagaagattgatgagcatgttggagttagactggcagcgggtgag
ccttcaggaaagagtgaacaggtgccaatgtcagtagatttttcaatctttgggtcaaaa
cctctgagtagaccgacaattaacagtgctgacaggtctcatctgaagaggaaacttgac
cttgaattccaacacaatgattaa
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