Hibiscus syriacus (Rose-of-Sharon): 120205289
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Entry
120205289 CDS
T09559
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120205289
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120205289
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF1803
Motif
Other DBs
NCBI-GeneID:
120205289
NCBI-ProteinID:
XP_039061131
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MTIFYLLSLLLCLHATSTFSIHTPRKISEAVPEYSTRRQLDTEQCATGNPIDDCWRCDPE
WESNRKKLADCAVGFGKDAIGGRDGEIYVVTDPGDGDPISPTPGTLRHAAIQPEPLWIIF
DHDMVISLRAQLLINSYKTVDGRGHDIEITNGPCMTLRNVSNVIIHNIYIHDCLPSGDAM
VWNPLPQYAISGGSDGDAISIFGSRDVWIDHCTLAKCYDGLIDATYGSTSITISNNYMLH
HNEVMLMGHSDEFLDDKNMQVTIAFNYFGEGLVQRMPRCRHGYFHIVNNVYVGWEMYAIG
GSANPTINSEGNVFIASDNNYAKEVTKRESSFDEWSNWNWRSEGDMMANGAFFTPSGEEG
PESYIRASSMVARPTSLITKTAQYAGILSCRKGYGC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacaatattctatctgctttccctactcctatgcttacatgctacatcaacattctcc
atacatacccctcggaaaatatccgaagccgtaccggagtactcaacgagaaggcagttg
gacacggaacaatgtgcaactggtaatcctatagatgattgctggaggtgtgaccctgaa
tgggagtccaacaggaaaaagctggccgactgcgcagttgggttcggtaaagatgccatc
gggggccgggatggtgaaatttatgtggtcacggatccgggtgacggtgatccgatatct
ccgactccaggtacgctgcgtcatgcggcgattcaacctgaacctctatggatcatcttt
gatcatgacatggtcataagcctaagagcacaactcctcatcaactcatacaagaccgtc
gatggaagaggacacgatatcgaaataacaaacggaccgtgcatgaccttacgcaatgtg
agtaacgtaatcatacataacatctacatacatgactgcttaccttcgggggatgcgatg
gtgtggaacccgttaccccaatacgcaataagcggtggatctgacggcgatgcaatctcg
atattcggctcaagggatgtctggatcgatcactgcacactagcaaagtgttacgacggg
cttatcgacgcaacgtacggttcgacgtccataacaatctcgaacaactatatgctacat
cacaacgaagtcatgctcatggggcatagtgatgagttccttgatgacaagaacatgcaa
gtaacaattgcgttcaactactttggggaaggcctggttcagagaatgccgaggtgcagg
catggttactttcatatcgtcaacaatgtctatgtcggttgggaaatgtatgcgatcgga
ggaagcgcgaacccgacgatcaatagcgaagggaatgtgttcatagcatcagataacaat
tatgcaaaggaggtgacgaaacgcgaaagctcgttcgacgagtggagcaattggaactgg
agatcggaaggagatatgatggcgaatggtgctttttttacgccatctggagaagaaggt
ccagaaagctacataagagcatcaagcatggtggctagaccaacttcacttataacaaag
acggcccagtatgctggcattctaagctgccgcaaaggctacggctgctag
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