Hibiscus syriacus (Rose-of-Sharon): 120206052
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Entry
120206052 CDS
T09559
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
hsyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120206052
09124 Replication and repair
03420 Nucleotide excision repair
120206052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120206052
03400 DNA repair and recombination proteins [BR:
hsyr03400
]
120206052
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120206052
DNA repair and recombination proteins [BR:
hsyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120206052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
120206052
NCBI-ProteinID:
XP_039061725
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MPQVKIIAKNFMDMVASLPAIKLDMLYRNQFICEAILRSLPPLAKKYVLQMLYIDDPITS
KSLQEWVIADGSSKHKVSIDRLIQLRVFEVIDRKKETTYKLNPTFQTSLRKHLIYGGILP
REPMPPNVIARLPTSEELDAYALEQWECFLLQLISSGQAEKSSSFSSSMMRIFQRGFLRQ
REKEAPRLTESGFQFLLMDTSAQLWYVIREYISNSEEQGVDQADLIAFLLELSFHTTGEA
YNLDTLTDYQTAMIKDLADLGLVKLQKGRKESWFIPTKLATNLSVSLADTTSRKQGFVVV
ETNFRMYAYSSSKLHCEILRLFSRVEYQLPNLIVAAITKESLYNAFENGITADQIVTFLQ
QNAHPRVAEKVPSVPENVTDQIRLWETDLHRVEMTPAHHYDEFPSRDVFEAASDFARMHS
GLLWEDANKMRMVVRAEIHMLMREHLRSQNK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgaagataatcgcgaagaatttcatggacatggtggcttcgttgcccgcc
attaagctggacatgctctatcgtaatcaattcatttgcgaagccattctcaggtcgctg
ccgcctctggcgaagaaatacgtactacagatgttgtacatcgatgatccaataacatcc
aagtcgttgcaggagtgggtgattgctgatggatcctctaagcacaaggtttccatcgat
cggttgattcagttaagagtatttgaagtaattgatcggaagaaggaaacaacttacaag
ttaaatcccacatttcagactagtctccggaagcatttgatatatggtgggattttgccg
agagaaccaatgcctccaaatgttattgcaagacttccaacctcggaggaactagatgcc
tatgcccttgagcaatgggagtgtttcttgctgcaacttataagttcaggacaagctgaa
aaatcatcaagcttcagctcttccatgatgagaatttttcagcgtggctttttacgtcaa
agagagaaagaagcaccaagattaactgagagtggtttccagttcttgctgatggataca
agtgcgcagctttggtatgttatcagagaatatatctccaattcagaggagcagggtgta
gaccaagcagacttaattgcctttttgctagaacttagttttcataccactggtgaggct
tataatttagatacactcacggattaccagacggccatgatcaaggaccttgcagacttg
ggattggtcaagcttcagaagggcaggaaagagagttggtttattcctactaaattagct
accaatctttcagtaagcttagcagatacaacatcaaggaaacaaggatttgttgttgtg
gaaacaaactttaggatgtacgcgtactcgtcatccaagttacactgtgaaattttacgt
ctattctcaagggtagagtatcaacttccaaacctcatagttgctgcaataacaaaagaa
agcctgtataatgcttttgaaaatggcattacagccgaccagatagttacattccttcag
cagaacgcccatcctcgtgttgctgagaaagtaccatcagtacctgaaaacgtcacagat
cagataagattgtgggaaactgatttgcacagagttgagatgactccggctcatcattat
gatgaatttccttcaagggatgtcttcgaggctgcttccgactttgcccgaatgcattct
ggtttactatgggaggatgcgaacaaaatgcgaatggttgtcagggcagagattcatatg
cttatgcgcgagcatcttcgcagtcaaaacaagtag
DBGET
integrated database retrieval system
