Hibiscus syriacus (Rose-of-Sharon): 120206273
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Entry
120206273 CDS
T09559
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03015
mRNA surveillance pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120206273
09122 Translation
03015 mRNA surveillance pathway
120206273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120206273
Spliceosome [BR:
hsyr03041
]
Complex A
Other components
Complex A specific factors
120206273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
120206273
NCBI-ProteinID:
XP_039061906
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MYGQDRREAAPPSYGGGYDSSGGSSGGHGGRGGGRGGGRGGGGGYSGGTQNRGGGGGYQG
ERGGRGGSRGGGGRDGDWLCPNPSCGNLNFASRVECNKCGAPSPAASDERGSGSTSGGHS
RGGGGGYGGNHGGRDGDRGGYNSGRSNNYNGGRGGNYDNRSGGSRRGSYGGSQGGEDGGY
GKVPPPAPSSYGGNYPPAPNAYGGNANYGMEAVPSPTGYTGGPTSYPPSYGGPAGGEGLS
DVRTGGRGGAPGGYDGGYGSGGPRNRGGGHGGPPVDTSVKIKQCDGNCGDSCDNSRIYIS
NLPPDVTIEELKDLFGGIGQVGRIKQKRGYKDQWPWNIKIYTDEKGNQKGDAVLSYEDPQ
AAHSAGSFFNNHVMRSYTISVAMAEKTAPKVYDHGGGRGGYGGGGNRRKDSYRDGGSGPD
RHNHGGNRLHPY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtacggccaagacagacgcgaagctgctccgccttcttatggtggtggatatgatagt
tctggaggctctagtggaggtcacgggggccgtggaggcggcagaggaggcggcagagga
ggaggtggaggatatagcggtggtactcaaaatcgaggaggcggaggaggctatcaagga
gagcgcggtggaagaggcggtagccgtggtggaggcggacgagatggtgattggctttgc
cctaaccccagctgtgggaatttgaactttgcaagtagagttgaatgtaacaaatgtggt
gcaccctctcctgcggcttctgatgaacgtggtagtggtagtactagtggtggtcatagc
agaggtggtggtgggggatatggtggtaatcatggaggtagagatggggatagaggtggt
tataatagtgggaggagtaacaactataatggaggcagaggtgggaattatgataataga
agtggtggtagtagacgtggttcttatgggggtagtcaaggaggggaagacggtggctat
ggtaaagttcctcctccagcgcccagttcttatggtggaaactatccacctgctcctaat
gcatatggtggaaatgcaaattatggaatggaagctgttccttcacctacaggctatact
ggtggacccacatcataccctccatcttatggtggccctgcaggtggtgagggtttgagt
gatgtgaggactggtggtcgagggggagcacctggtggatatgatggtgggtatgggtct
ggtggtcctcgaaatcgaggaggtggtcatggtggccctcctgttgacacatcagttaag
atcaagcaatgtgacggcaactgtggtgattcttgtgacaactcaagaatatacatatca
aatttgccacctgatgttactattgaagaattaaaagacctttttggtggcattggacaa
gttggaagaattaagcagaagcgtggctataaagatcaatggccctggaatattaaaata
tacacagatgagaaaggaaaccagaaaggcgatgcagttttgtcttatgaagatcctcag
gctgctcactctgctggcagtttctttaacaatcatgtcatgagaagctatacaatcagt
gtggctatggcagagaagactgcacccaaagtatatgatcatggaggtggtagaggtggc
tacggaggtggtggcaacaggcgcaaggatagttacagagatggaggttctggaccagac
aggcacaaccatggtggaaaccgtttgcatccgtattga
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