Hibiscus syriacus (Rose-of-Sharon): 120207301
Help
Entry
120207301 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120207301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120207301
03009 Ribosome biogenesis [BR:
hsyr03009
]
120207301
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120207301
Spliceosome [BR:
hsyr03041
]
Complex A
U1 snRNP components
U1 related factors
120207301
Complex B
120207301
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120207301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120207301
NCBI-ProteinID:
XP_039062722
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MAAAATATATATATASGGTQYAPPDPTLPKPWKGLVDCKTGYLYFWNPVTSVTQYERPTN
VDSGPKCSSVPMGSSVLVQQSYEGRYRYSSEKENNRYGRGCDTVPKLESVLGSYQNARGG
PFHSQNTPNGTASSVIGGSFGRGLGSAAGGSNLSGNAYCRQHEITVTGGEVPPPFSSFES
TSFPSEILREVHNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLLPGFMHLKR
CRNDPQMGPTMLVLSPTRELATQIQEEANKFGKSSRISCTCLYGGAPKGPQLREIERGVD
IVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYT
ATWPKEVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMEKHRRLEQILHSQEP
GSKIIVFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVA
ARGLDVKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGLACTFFGDQDSKHASELIKVLE
GANQRVPAELRDMASRGGGRGMPRRWTPISGGCDEGRGGRTGFGYGGRDGGRGGRGISTL
PSSWNKRTGGEGYRHESRDSYNKGRSRSRSPAGWGDCSKSGFHERSRSRSADRYDSAAGR
QRS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcaactgcaactgcaactgcaactgcaactgcatctggtggtacacaa
tatgctccgccagacccaactcttcccaaaccatggaaaggcctagttgattgtaaaact
ggttatctctacttttggaatccagtaacaagtgtcacacaatacgagaggcctacaaat
gtagattctggcccaaaatgttcttcagtgcctatgggctcttcagtgctggttcaacaa
tcttatgaagggcgttataggtatagttctgagaaggagaacaatcggtatggaagagga
tgcgatactgtaccaaaacttgagtcagtattagggagttatcagaatgcaaggggtgga
ccatttcattcccagaatacacctaatgggactgccagctctgtgattggaggatcattt
ggtagaggactaggatcagcagctggaggaagtaatttgtctggtaatgcttattgtcgt
cagcatgagataacagtaactggaggtgaagtaccaccacccttttcatcatttgaatct
actagctttccttctgagatactgagagaggtgcataatgctgggttttctgctccgact
cccattcaggctcagtcatggccaattgcattgcaaggtagagacatagtggccattgca
aaaacaggttctgggaaaacattgggttatctacttcctggatttatgcatctcaaacgt
tgccgtaatgatcctcaaatgggtccaaccatgttagttttatcaccaactagggagttg
gctactcagatacaagaggaagctaacaagtttgggaaatcatcaagaattagttgcacg
tgtttatacgggggagcaccaaagggtcctcagttgagagagattgagagaggagtagat
attgtggttgccactcctggcaggttaaatgatattctggagatgaggagaatcagcctc
caccaagtttcttaccttgtgttagatgaggctgatcgcatgttagacatgggatttgaa
ccacaaatacggaagattgtgaaagaagttcctacccgcaggcagacactaatgtacacg
gcaacatggccaaaggaagtccgtaaaattgcagctgatctactggtaaatcctgttcag
gtcaacatcggcaatattgatgagcttgtggcaaacaagtctattacccagtatgttgaa
gtattatcaccaatggaaaagcacagaagattggagcagatactgcactcacaagaacca
ggatccaagataattgttttttgttcaactaagaagatgtgtgatcaacttgctcgcaac
ctcactcgacaatttggagctgctgctatccatggagacaagtctcaggctgacagagat
tatgtgttgagtcagttccgcactgggaggtccccagtgcttgttgctactgatgttgct
gctcgcggattggatgttaaagacataagggtggtaatcaactatgactttcctactggg
gtcgaggattatgttcataggattgggaggactggaagggcaggtgctactggattagca
tgtacattctttggtgatcaggattcaaagcatgcttcagagctaatcaaagttctagaa
ggtgcaaaccagagggtgcctgcagaacttcgtgatatggcttcacgtggtggtgggagg
ggaatgcctagacgttggactcccatttctggtggctgtgatgagggacgtggtggtcgt
actgggtttggatatggtggcagggatggtggcagaggtggtcgtggaatttctacatta
ccatctagctggaataagagaactggaggagagggatataggcacgagtcccgtgatagt
tacaacaagggaagaagtcggagtcggagtcctgcaggttggggtgattgcagcaaaagt
ggtttccatgaacgcagccggagtcgtagtgctgacaggtatgatagtgctgctggacgc
cagcgctcgtga
DBGET
integrated database retrieval system
