Hibiscus syriacus (Rose-of-Sharon): 120207335
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Entry
120207335 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase VPS15-like
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120207335
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsyr01001
]
120207335
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsyr04131
]
120207335
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120207335
Protein kinases [BR:
hsyr01001
]
Serine/threonine kinases: Other
VPS15 family
120207335
Membrane trafficking [BR:
hsyr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120207335
Autophagy
Autophagosome formation proteins
PI3K complex
120207335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
HEAT
PK_Tyr_Ser-Thr
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT_EZ
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
HEAT_2
Cohesin_HEAT
APH
TCAD9
Motif
Other DBs
NCBI-GeneID:
120207335
NCBI-ProteinID:
XP_039062741
LinkDB
All DBs
Position
Unknown
AA seq
1549 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVHIKEIFRSLDHPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAAKQCHEKGICHGDIKCENVLVTSWNWVYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAIGCVIGEVFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDIGVRKMILHMIQLEPESRLSAESYLQNYVAAVFP
GYFSPFLHGFYCCWNPLHSDMRIAMCQRVFPEILKQMMSKRSNDEMGGGLGKLHTLSGKQ
SQDIVSKQQSQEIVTKQKLSSTNHLLTKREKMDNGSVGDRFKLLGNIDTLLGDVEQSNHY
LGENPTEGDTSKSALSQDFKQNGIESPXFLHQNISDLFRKNDHPFLKKITMDDLNSLMSD
YDSQSDTFGMPFLPLPEDSMKCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKTSSLYID
DEDRLQRVLPYVIAMLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSML
PDDPEESVRICYASNIAKLALTAYGFLIHSIRLSEAGVLNELNLSPKSLASSGESSGRIQ
RSNSDAQLGQLRKSIAEVVQELVMGQKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPIL
PAFLNDRDEQLRAVFYGQIVFVCFFVGQRSVEEYLLPYIEQALGDAIEAVIVNALDCLAV
LCKNGFLQKRILLEMIERSFPLLCFPSQWVRRSVVTFLSSSSECLGAVDSFVFLAPVIQP
FLRRQPASLDSKKALLSCLKPPVSREVFYEVLENARSSDMLERQRKIWYNSSVQSKQWEI
ADLLKRGAGELDSMKYWSEKQQSIGGHRPIDSALQQSGLTEDDDDTKLRVLGGHIRNASS
VIDMRDPLCSEKLKFSGLTSPQLNGLNSFMCDKSSEGIPLYSFSMDKRAMVAPPAASDTP
LPCIDPVSKSFTMSSSVPAPKLVSGSFGITGGSKQFYRVVHEPESRENDQIAYVNSKFQD
MGLSGTVKGTSVPMEDASASTDFTGLPSFARSSSIPDSGWRPRGVLVAHLQEHRSAVNDI
AVSNDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTAMLQNSAQVVVG
ACDGTIHMFSVDHISRGLGNVVEKYSGIADIKKKDVKEGAILTLFNYPVDNCGIQTFMYS
TQNCGIHLWDTRSSSNAWTLKAVLEEGYISCLVAGPCGNWFVSGSSRGVLTLWDLRFCIP
VNSWQYSLVCPVEKMCLFVPPSSVSVSTTARPLIYVAAGCNEVSLWNAENGSCHQVFRAA
NYDTEAEMSDLPWALAKPSTKRSSKSDPRRNANPKYRVDELNEPPPRLPGIRALLPLPGG
DLLTGGTDLRIRRWDHCSPDRSYCICGPNFKGVGNDDFYEARSSFGAQVVQETKRRPLTM
KLTAKAVIAAAATDSAGCHHDSVLSLASVKLNQRHLISSSRDGAIKVWK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcgaacgacgcaagtctcggcgacggagtattacctgcacgac
ctgccgtcttcgtacaatttggtgctgaaggaggtactcggccggggccgattcttcaag
tcgatcctgtgtaagcacgacgaagggctcgtcctcgttaaggtctacttcaaacgaggc
gattccatcgatctccgtgagtacgagcgccgtctagttcacatcaaagaaatattccgg
tcacttgaccacccccatgtttggcccttccagttttggcaagaaacagataaggcagca
tatttattaaggcaatattttttcaacaatttgcatgatcgattaagtactcggccgttt
ttgagtctcgttgaaaagaagtggttggcgtttcagttgcttcttgcagcgaagcagtgc
catgagaaggggatatgccatggtgatattaagtgtgagaatgtgttggttacctcgtgg
aactgggtttatctagctgattttgcctcattcaagcctacatatattccttatgatgac
ccttcggatttctcctttttctttgacactggaggaagaaggctgtgttatcttgcaccg
gagagattttatgagcatggaggtgaaatgcaagttgcccaagatgctcctttgaagcca
tctatggacatctttgctattggatgtgttattggggaggttttccttgagggccagcca
ctgtttgaactttcccagcttcttgcatatcgcagagggcaatatgatcctagtcaacat
cttgaaaagatcccagatattggagtacgaaagatgatacttcatatgatccagcttgaa
ccagagtctcgcctctctgctgaaagttatctacagaattatgtagctgctgtatttcct
ggctacttctcaccatttctgcatggtttttattgttgctggaatcctcttcattctgat
atgaggattgcaatgtgccagagggttttccccgagatattgaagcaaatgatgagcaag
aggtcaaatgatgagatgggagggggtcttggcaaattgcataccttaagtggtaaacag
tcgcaagatattgtttcaaaacaacagtcacaagagatcgttacaaaacaaaagttgagc
tcaacaaatcacttgttgacaaaaagagaaaagatggataatggttctgttggggatcgg
ttcaagcttcttggcaacatcgataccctacttggagatgttgaacagagcaatcattac
cttggggagaatccaacagaaggagatacatccaaaagtgcactttcccaagattttaaa
caaaatggcattgaatctcccnacttccttcatcaaaatatttctgatttgtttaggaaa
aatgatcacccttttctgaaaaagattacaatggatgatttaaactcattgatgtctgac
tatgacagtcaatcagacaccttcggaatgccttttctaccattacccgaagatagtatg
aaatgtgaagggatggttttaattgcctctttgctttgctcctgcatacgtaatgttaag
ttacctcatttgaggagaggggcgatacttttgctgaagacctcttcattatacattgat
gatgaagatcgcttgcagcgagtacttccatatgtaattgcaatgctttctgacccagcg
gcaattgtgcggtgtgctgcccttgagactttatgtgacattctacccttagttcgagat
tttcctcctagtgatgcaaaaattttcccagagtacatccttccaatgctttccatgctt
cctgatgatccagaggaaagtgtgagaatttgttatgcaagcaatatagctaagctggct
ctaacagcttatggattcttgatacattcaataaggcttagcgaggctggagttcttaat
gaattgaatttgtctccgaagtctttagcatcatctggtgagtcatctgggcgcattcag
aggtcaaatagtgatgcacagctaggccaattaaggaagtccattgcagaggtagttcag
gagcttgtaatgggtcaaaagcaaactccaaacattagaagagctctccttcaggacatt
ggcaacttatgctgcttttttggccagagacagagtaatgattttttgttgcccatactc
ccagcctttttgaatgatagagatgagcagctaagggcagtgttttatgggcaaattgtg
tttgtctgcttctttgtgggccaacgaagtgtggaggaatatcttttaccttatattgag
caggctttaggtgatgcaatagaggccgttatagttaatgcactggattgtttggctgtt
ctgtgcaaaaatggtttcttacagaaaagaatattgcttgaaatgatagaacgttccttt
ccattgttatgttttcctagtcaatgggtaaggaggtcggttgtcactttcctttcatct
agtagtgagtgcttgggtgctgtagattctttcgttttccttgctccagtaatacaacct
ttcctacgtcgacaacctgcatctctggactccaaaaaagctcttctttcttgtttgaag
ccacctgtctcaagggaagtattttatgaagtcttagaaaatgctaggagttcagacatg
ttggagagacagagaaaaatatggtacaattcatcagtgcaatcgaaacaatgggaaatt
gctgatttactgaagagaggggctggggaattagactcaatgaagtattggtctgagaaa
caacagtctattggaggtcatagacccattgatagtgcattgcagcaatctgggctaaca
gaagatgatgacgataccaagctgagagttctggggggtcatatacgaaatgcttctagt
gtaattgacatgcgtgatccattatgctcagagaagctaaagttttcaggtttaacatct
ccgcagctcaatggtttaaacagtttcatgtgtgataagtcttcagaaggtatacctttg
tactcttttagcatggacaagcgagcaatggtagctcctccagcagcttctgatactcct
ttgccttgtatagatccagttagtaaatcatttaccatgtctagttcagttccagcacct
aagcttgtttcaggctcctttggtatcactggtggttctaaacaattttacagagttgta
catgaaccagaaagtcgtgaaaatgatcaaatagcctatgttaatagtaaatttcaagac
atgggattatctggtacagtaaaaggaacttctgttccaatggaagatgcttctgcttca
actgatttcacaggactaccctcatttgctcggtcttcatcaattccagattcaggttgg
aggccgcgtggggtgttggttgcacacctgcaggagcaccgatctgctgtcaatgatatt
gcagtttcaaatgatcacagtttctttgtgagtgcatctgatgattccactgtcaaagtg
tgggattcaagaaagttggagaaggatatatcgtttaggtcaaggctaacttatcacttg
gaaggaagccgagcactatgcactgcaatgctccaaaattctgctcaagttgttgttgga
gcatgcgatgggacaatccatatgttttctgttgatcacatctctagaggtcttggaaat
gttgttgaaaagtattcaggtatcgctgatataaaaaagaaggatgtgaaagaaggtgca
atacttacccttttcaactaccctgtggataactgtggcattcagacatttatgtacagc
acccaaaattgtggtattcatctttgggatacgagatcaagttcaaatgcatggacatta
aaagcagttctggaggaaggttacatatcgtgtctggttgcaggcccttgcgggaattgg
tttgtttcagggtcttctaggggtgtgcttaccctttgggatttaaggttctgtattcct
gtgaactcatggcagtattctcttgtatgccctgtagaaaagatgtgtctctttgttcct
ccttcaagtgtctcagtttctacaactgcaaggccgcttatttatgtggctgctggctgc
aatgaagtttcactttggaatgcagagaatgggagctgccaccaggtatttagggctgca
aattatgacactgaagcagaaatgtctgatttaccatgggccttggcaaagccatccact
aaaagaagctctaaatctgatccaaggaggaatgcaaatccaaagtatcgagtggatgaa
ctaaatgaacccccaccacgtcttccgggtatccgtgcattacttcctctacctggtggt
gatctattgactggaggcactgacttaaggattcgccgctgggaccattgcagccctgat
agaagttactgtatctgtggcccaaattttaagggagttggaaatgatgatttctatgaa
gcaagatcaagttttggggcacaagttgtacaggaaactaagagacgacctctaacaatg
aagttgacagcaaaagcagttattgctgctgctgctactgattctgctggatgccaccac
gattccgtcctctctttggcttctgtgaaattgaaccaaagacacttgatatcaagcagt
agagatggggctattaaggtttggaagtga
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integrated database retrieval system
