Hibiscus syriacus (Rose-of-Sharon): 120207404
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Entry
120207404 CDS
T09559
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120207404
Transcription machinery [BR:
hsyr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
120207404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_5
DprA_WH
DUF6697
GerE
HNH_repeat
Motif
Other DBs
NCBI-GeneID:
120207404
NCBI-ProteinID:
XP_039062813
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MGVVSISSSAARTPLGLSTKFCTQRCTLRMPYILAFKADKSNNTTLVTPQELNLSPVETT
KGHPKRRGKAKKASKTANRVLDDEGSPCTMDVDYNEAAAKLENLYKLSPSTRTFDEVGEK
SETKGRHPRRKKSKESDGKLDDANDKIVIRNRTKKTRRLNLDKRVELKRNREEKPVVSGQ
RKKGIMNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLEA
KENLQKELGRDPTEDELAEATNMSAAQVSRHLEVGRAARNKLIKHNLRLVLFVINKYFQD
FANGPRFQDLCQAGVKGLITGIDRFEPRRKFRLSTYGLFWIRHAIIRSMTVSNFTRVPFG
LESVRVEIQRTRLKLLFELQREPTDDEVIEKVGISPERYQEVMRASKSVGSLHSRHSVTQ
EEFISGITDVDGVGGDHRKQPALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLGEI
AGNLNISREMVRKHEVKALMKLKHPARMDYLRRYVV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttagcatttctagttcagctgcccgaactccactaggactaagcacaaag
ttctgtactcaaagatgtacattgagaatgccttatattttagcatttaaagcagataaa
tccaataatacaactctagttacgcctcaagaacttaatctttcgccggtggaaaccact
aaggggcacccgaagcgacgtgggaaagctaaaaaggcttcaaaaacagcaaaccgcgtc
ttggatgatgaaggttctccgtgcactatggatgtagattacaatgaagctgctgcaaaa
ctcgaaaacctttataagcttagcccttcaactcgaacatttgatgaagtaggggaaaaa
agtgagacaaaaggacgtcatccgaggagaaagaaatctaaagaaagtgatgggaaatta
gatgatgctaatgataagattgtcattaggaacaggactaagaagactagaagattgaat
cttgataaaagggttgaactgaaaaggaacagagaagaaaagccagttgtttctggtcag
aggaaaaagggtattatgaacgaaagtgagaagatcgataggcttgtccgggactattca
gcttcaaccgatttggtcagcttggactggaaaaagatgaagatacctcctgttctaccg
tccactgaacatacatggttgtttaagctaatgcaaccaatgaaggcattgcttgaggcg
aaagagaacttgcaaaaggaattgggtagagatcctactgaagatgaattagctgaggca
acaaatatgagtgcagctcaagtgagtagacatttagaggtcggtcgagctgctagaaat
aagctcattaagcataatctccggcttgttttgtttgtgataaacaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggcaggagtcaaaggacttattaca
ggcattgatcgctttgaaccaagaaggaaattccggctttcgacttatggtcttttttgg
attaggcatgcaattatacgttctatgacagtatcaaacttcacccgtgtcccgtttgga
cttgaatctgttagagtagaaatccaaagaaccagactgaaattattgtttgaacttcaa
agagaaccaacagacgatgaagtaattgaaaaggttgggatctctcctgagaggtaccaa
gaagtaatgagggcctcaaaatccgttgggtctcttcattcgaggcattcggtcacgcaa
gaagagttcattagtggaatcaccgatgttgatggtgttggcggtgatcaccggaagcaa
cctgctcttctcaggcttgcgcttgatgatgtgcttgattctctgaagccgaaagagagc
ctggtgatgaggcagagatacgggctagatggtaaaggtgatagaacattaggagaaatt
gctgggaacttaaatatttcgagagaaatggtccgaaagcacgaagtaaaggcgctgatg
aagctcaagcatccagcccgaatggactatcttcgccggtatgtagtctga
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