Hibiscus syriacus (Rose-of-Sharon): 120207470
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Entry
120207470 CDS
T09559
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120207470
Spliceosome [BR:
hsyr03041
]
Common components
Common spliceosomal components
General mRNP proteins
120207470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
120207470
NCBI-ProteinID:
XP_039062859
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MDFDECDYLEKTVEELEDSKKKKKKKKKKKDGGGLEDKSERSYRKRDGDREEEEGDGKSS
SKKSRSGRVEDDEERRDPDKDRHGNSRDRDRERERDIDRDLERRSSRERDKERERERKDK
DKEKEREGRERSSSRSRRHESDREIERDRRERSSSRSRRHESDRELERERERDRRERSSS
RLRRHESEREQERERDIDIRDSRRFKDKKDAVEPEADPERDQRTVFAYQMPLKATERDVY
EFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLSQPVMVKPSEA
EKNLVQSTTSGAGAGSVVGTYGVVDRKLYVGNLHFNMTEMQLRQIFEPFGPVELVQLPLD
LETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVVTQDTTAKSADFD
DDEGGGLALNAQSRALLMQKLDRSGIATSITGSLGLSLVNGSASAQQTVTLPVNGQGAYP
ALVLPPIMSTTALDLIGQPSECLLLKNMFDPATETESDFDLDIKDDVEEECSKHGRVKHI
YVDKNSAGCVYLRFDSTEAAGKAQRAMHMRWFAGRSISALFMRPHEYEARFKG
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtgcgactatctggaaaaaaccgttgaggaacttgaagattcgaag
aagaagaagaagaagaagaagaagaagaaagacggaggaggattggaggataagagtgag
agaagctataggaagagagatggcgatagagaggaagaggagggggatggaaagagcagc
agcaagaaatcgagaagcggccgcgttgaggacgacgaggagaggagagatccggataag
gataggcacggaaacagccgcgacagagatagggaaagggagagagatattgatagggat
ttagagaggaggagcagtagagagagggataaggaaagggagagggaaagaaaagacaaa
gataaggagaaagagagggaagggagagagagaagtagcagtaggtcgagaaggcacgaa
agtgatcgtgagattgagagagataggagggagagaagcagcagtaggtcgaggaggcat
gagagtgatcgtgagctagagagggagcgggagagagataggagagagagaagcagtagt
aggttgaggaggcacgagagtgagcgcgagcaagagagggagcgtgacattgacatcagg
gatagcaggagatttaaggataagaaagatgcagtggagcctgaagctgatcctgagagg
gaccagagaacagtttttgcttaccagatgcctctaaaagcaactgagagagatgtctat
gaattcttctcaaaagcaggcaaggtgagggatgttcggctgatcatggataggaattca
agacgatcaaagggagttgggtatattgagttttacgatgtgatgtctgtgccaatggca
atagcattgtctggtcaactactactcagtcaacctgtgatggttaaaccttcagaggct
gaaaagaaccttgttcagtccactacctctggtgcaggcgcaggcagtgtcgtgggaaca
tatggagttgttgatagaaaattatatgtagggaatttgcactttaacatgacagaaatg
cagcttagacagatatttgaaccttttggacctgtggagcttgtgcaactaccacttgac
cttgagactgggcagtgcaaaggttttgggtttgttcagtttgctcaacttgaacatgca
aaagcagctcaaagtgccttgaatgggaaactggagattgctggtcgaaccattaaggtt
tcatctgttacagaccatgttgttactcaagatactacagcaaaatctgcagattttgac
gatgatgaggggggtggcttggctttgaatgctcaatcaagagcattgcttatgcagaaa
ctggatcgctctggtattgcaacaagcattacgggatcccttggattatccctcgttaat
ggatctgcttcagctcagcagactgttacattgcctgtcaatggccagggggcatatccg
gcactagttctaccaccaatcatgtctactacagcccttgatcttattggacagcccagt
gagtgtttgctgttgaagaatatgtttgatcctgcaactgagacggagtcagattttgac
ttggatatcaaagatgatgttgaagaagaatgcagcaaacatggcagggtgaagcatatt
tatgttgacaaaaacagtgctggttgtgtgtatctccgatttgattccacagaagcagcg
ggtaaagctcaacgtgcaatgcacatgagatggtttgcagggcgatcaatatcagcatta
tttatgcgaccccatgagtacgaagcgaggtttaaaggttga
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