Hibiscus syriacus (Rose-of-Sharon): 120207533
Help
Entry
120207533 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL7-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120207533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120207533
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120207533
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
HECT type E3
120207533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
DUF1654
Motif
Other DBs
NCBI-GeneID:
120207533
NCBI-ProteinID:
XP_039062914
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MEDPRKHQVSLRGASAREISRDALLEKVFQEREHRNYARKAASASIYIQKVWRSYNETRK
VAIKFQDEWECLVKNPAEFMTGELISSRVLRPFIFFIKCLSIRRQKILPRELKCTQTCFG
ILLESINSTDSKKNICSLIVATTELRRTSMYQMQMLISLCSFILSECDTSSAGSQDIVVL
TSLALRLLVVLTDLKNWKIANDENIKEADAAVKNLVTFMGSCRSGLYASLRRYISRLDVC
FSPKLKSIVQTDDKFLISASAITIAIRPFSLTTFNMADCSKFEVHSAADQFCLYLLTIPW
LTQRLPAVLLPALKHKSTLSPCFQLLLISKDKIVRKMSDIDQSCMDCSLNVVPPVGWALA
NIIALTAGSENDFLHSGALNQGLEYASYVHVVTILADNLLAWLHNAGWEKVNQNLEGNYG
AYEPPVSMQENNTASASLKTSFIDLFRPVSQQWHLKMLLEISKAYAHTDETKILSPNNLE
SMENLRLLDIAYFYSYMLRIFAAFNPMIGPFPVLNMLSFTPGFLGNLWGVLESSIFQGNR
HTFEDANHSRSKGSGKKKKGIDKKLKQASSDGVGKWANVLQKLTGKSQVEVDFSDPAGDD
QVDEDAFDIWDVEPFRHGPQGISKDMSCLLHLFCATYSHLLLVLDDIEFYEKQDPFTLEQ
QRRIASVLNTLVYNGLSYSVGQQNASLMDSAIRCLHLIYERDCRHQFCPPALWLSPARRS
RPPIAVAARTHEVLSANIRSEDAVIGHNMGSVITSMPHVFPFQERVQMFREFISMDKVSR
KMAGEISGPGSRSIEIVIRRGHIVEDGFRQLNSLGSRLKSSIHVSFVSECGLPEAGLDYG
GLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPNAAARFLENGIQMIEFLGRVVGKALY
EGILLDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNVMYVKHYNGDVEELCLDFTVTEE
SFGKRHVIELKPGGKNVCVTNVNKMQYVHAMADYKLNRQILPFSNAFYRGLTDLISPSWL
KLFNASEFNQLLSGGDHDIDVDDLRNNTRYTGGYSEGSRTVKLFWEVMNDFEPKERCMLL
KFVTSCSRAPLLGFRYLQPSFTIHKVASDAPLWAAIGGSDVERLPSASTCYNTLKLPTYK
RLSTLKAKLRYAINSNAGFELS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcgaaaacatcaggtatcgttgagaggagcaagcgcaagagaaatatca
agagatgcgctactcgagaaagtttttcaagagagagagcatcgcaattatgctagaaaa
gctgcatccgcttcaatctacatccagaaagtttggcgaagttataacgagactaggaaa
gtggctatcaaattccaagatgaatgggaatgtttggtgaaaaatccagcagagtttatg
acgggggaattgatttccagcagggttttaaggccatttattttcttcattaaatgttta
tctattcgtcggcaaaagattcttcccagagaattaaaatgcacgcaaacttgctttggc
atactcttggaaagcataaattcaaccgattcaaagaagaatatttgctccctgatcgtg
gccacgactgaactgagaagaacatccatgtaccaaatgcaaatgctgatttcactctgc
tcgttcattctttcagagtgtgatacgtctagtgcagggagtcaagatattgtcgttttg
acatctctcgcattacgtcttcttgttgtcttaactgatctgaaaaattggaagattgct
aatgatgagaacattaaggaggcagatgctgcagtgaagaacttggttacctttatggga
agttgtagaagtggcctttatgcatctctgagaagatatataagtagattggatgtttgt
ttttctcctaaattgaaaagtattgttcagactgatgataagttcttgatcagcgcaagt
gcaattactatagctattcgcccatttagcctgacaacctttaatatggctgactgtagt
aagtttgaagtgcattctgcagctgatcagttctgtttatatttacttacaattccttgg
ctcactcaacgtctaccagctgttcttctacctgctctaaagcacaaatctactctttca
ccatgctttcaacttttactgatttcaaaagataaaattgtaagaaagatgtcagacatt
gatcagtcctgcatggactgttctttgaatgtagttccaccagttggctgggctcttgcg
aacattatagccctaactgctgggagtgagaatgactttctgcattccggagccttgaac
caaggtctagaatatgcatcctatgtccatgttgtaaccattcttgcagacaacttattg
gcatggcttcataatgctgggtgggaaaaggtgaatcagaatcttgaaggcaattatgga
gcttatgaaccacctgtcagcatgcaggagaacaacactgcaagtgcttccttaaagaca
tccttcattgacctatttagacctgtttctcagcaatggcatcttaaaatgcttttggaa
atatcaaaagcatatgctcatacagatgagaccaagatcctatctccaaacaacttagaa
tctatggagaacttgagattgcttgatattgcatatttctactcatacatgcttaggata
tttgcggcattcaatcccatgattggaccatttcctgttctcaatatgctatctttcact
cctggatttcttggcaacctttggggagtgttagaaagttccattttccaagggaatagg
cacacctttgaagatgctaatcattccagaagcaaaggttcggggaagaaaaaaaaagga
attgataaaaaactaaaacaggccagtagtgatggagttggtaaatgggccaatgtattg
cagaagttaactggaaaatcacaagtagaggttgatttttcagatccagctggagatgat
caagttgacgaggatgcttttgatatttgggatgtagagcctttcaggcatggtcctcaa
ggcatttcaaaagatatgtcttgtcttcttcatctgttctgtgccacctattctcatctg
ctattagttcttgatgacatagagttttacgagaaacaggatccattcacactggagcaa
caacggagaattgcttcagtgctcaatacactagtctataatggtctgtcgtatagtgta
ggccaacagaatgcttctcttatggattctgccatcagatgcttgcatctaatctatgaa
agagattgcagacaccagttctgcccccctgctttgtggctttcaccagctagaaggagc
cggcctccaattgcagtagctgccagaactcatgaagttctatcagctaatatcagatca
gaggatgctgtaattggtcacaacatgggttctgtaatcaccagtatgccacatgtattt
ccatttcaagaaagggttcaaatgtttagggagtttatcagcatggataaagtctctcgg
aaaatggctggtgaaatatctggtcctggttctcgatcaattgagatagtaattcgtcga
ggtcatatcgttgaggatggctttcgacaattaaattcacttggttcacgattgaagtca
tcaatccatgtttcttttgttagtgaatgtggcctcccagaggctggtctggattatggt
ggattatctaaagaattcttaactgatatatctaaagcagcttttgctcctgagtatgga
ttattttcccaaacatcaacttcggacagacttctaatacctaatgcagctgcaagattt
ctagagaatggtatccagatgatcgagttccttggaagggttgttggtaaagcactctat
gaaggaatattactagactactctttttcacatgtttttgtgcaaaagctgttaggccga
tatagctttcttgatgaactgtcaactcttgatcccgagctttaccgaaatgttatgtat
gtcaagcactataatggtgatgttgaggagctctgtctagatttcacagttactgaagaa
tcttttggtaaacggcatgttatcgagcttaaacctggtggcaagaatgtttgtgtgacc
aatgtgaacaagatgcagtatgttcatgcaatggcagattacaaactcaaccgacagata
cttcccttttcaaatgcattttatagggggttaactgatcttatatctccctcttggttg
aagttatttaatgcaagtgaatttaatcagttgctttctggtggagaccatgatattgat
gttgatgacctcagaaataacacacggtatactggtggttattccgagggaagtcgaaca
gttaaacttttctgggaggttatgaatgattttgagccaaaagagcgatgcatgctgcta
aaatttgtgaccagttgttcccgagctcctttactggggttcagatacttgcagccttct
ttcacaattcataaggttgcaagtgatgctcctctttgggctgcaattggaggttcagat
gtggagcgacttccatcagcttctacatgctataacactctcaagcttccaacatataag
aggttaagcactctgaaagcaaagcttcgttatgcaatcaattctaatgctggattcgaa
ctttcatag
DBGET
integrated database retrieval system
