Hibiscus syriacus (Rose-of-Sharon): 120207703
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Entry
120207703 CDS
T09559
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120207703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120207703
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120207703
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
120207703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120207703
NCBI-ProteinID:
XP_039063056
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MEIAPAASRPPPGFENPSSSTDAVVEDSMKPSSSTSFTSSEKEEKATSSMSFGAAAAGAA
EMEEEEEEDDDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCK
HAFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWR
LAFVRSFGEAQRLFLSHISTTIILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGD
AEREDEVDRNGARAARRPAGQANRNLAGDGNGEDVVGAQGIGGAGQMIRRNAENVAARWE
MQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVI
FVPFSIGRIILYYVSWLFSSASGPVLSVVMPLTDTALSLANITLKNALTAVTNLTSEGQG
QVVEMLKTNSTRVAEVSSNTSAPFSVDLLKGVSIGSSRLSDVTTLAIGYIFIFSLVFFYL
GIVTLIRYTRGEPLTMGRFYGIASIAETIPSLFRQFLAAMRHLMTMIKVAFLLVIELGVF
PLMCGWWLDVCTIRMFGKSMSQRVQFFSVSPLASSLIHWVVGIVYMLQISIFVSLLRGVL
RNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKFAMRMT
PSIFPLDISVSDPFTEIPADMLLFQICIPFAVEHFKLRTTIKSLLRHWFTAVGWALGLTD
FLLPRPEENGAQEIVNVEQGQQDRLQIVQGAQEQAMVAFAADDDPNRGLASGNSNAVEEF
DGDEQTDSDKYSFVLRIVLLLVIAWITLLVFNSALIVVPISLGRALFNAIPLLPITHGIK
CNDLYAFVIGSYFIWTVLAGARYSIEHIRTKRASVLLGQIWKWGVIVIKSSLLLSIWIFI
IPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDDSW
RVKFERVREDGFSRLQGLWVLREIVFPIIMKLLTALCLPYVLARGVFPVLGYPLVVNSAV
YRFAWLGCLCLSFLCFCAKRFHVWFTNLHNSIRDDRYLIGRQLHNFGEDSEQKQSETGTS
SELPQGTGIIRQPDRDADVGLRLRRVN
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgctcccgcggcttctcgtcctcctccgggatttgaaaaccccagttcctcc
acagatgccgttgtagaagacagcatgaagccgtcttcatctacttcgttcacatcgtca
gagaaggaagaaaaagcgacgtcatcgatgtcgttcggggcagcggcggcgggtgcggcg
gagatggaggaggaggaggaagaagatgatgacgtttgcaggatctgccggaacccggga
gatgctgagaatccgcttcgatacccttgcgcgtgtagcggaagtatcaaatttgtccac
caggattgccttcttcaatggctgaatcacagcaatgctcgccaatgcgaggtttgcaag
catgcattttctttctctcctgtgtatgctgagaatgctccagcaaggcttccttttcag
gagtttgttgttgggatggcaatgaaagcctgccatgttctgcagttctttttgcgcctt
agttttgtactctcagtgtggctcctcattatacctttcattaccttttggatatggcgc
ttggcttttgtcaggagttttggtgaagctcagagattattcctaagccacatttcaacc
acaatcattctaactgattgcttgcacgggttcctactttctgctagcattgtgtttatt
tttcttggagccacttctttgagggattattttcggcatttgcgagagcttggaggagat
gctgagagagaagatgaagtggataggaatggtgctcgtgctgctaggcgacccgcaggg
caagctaataggaatttagccggtgatggtaatggtgaagatgttgttggagcacaaggt
attggtggagctggccaaatgatcagaaggaatgctgaaaatgtggccgctcgttgggaa
atgcaggcagctcgtcttgaagctcacgttgaacagatgtttgatggcctggatgatgct
gatggcgccgaggatgtaccatttgatgagcttgttggcatgcagggtcctgttttccat
ttggttgagaatgcattcacggttctagcgagcaatatgatattccttggtgtagtaata
tttgtgcctttctctataggccgcattattctctattatgtatcttggcttttctcttct
gcaagtggtccggtgctgtcagtagtcatgccactgacggatactgccctttccttggca
aacatcacattgaagaacgcattaactgccgttacaaatttgacatcagaaggccaaggc
caggttgtagaaatgttgaaaacaaactctaccagagtcgctgaagtttcaagcaacaca
agtgcaccattttcagtagatctcttgaaaggagtatctatcggatcatcaaggctttcg
gatgttacaactcttgctattgggtacatttttatattctccttggtcttcttctaccta
ggtattgtcactttgattaggtacactaggggtgagcctttgacaatggggaggttctat
ggaattgcctcaatagctgagacaataccatccctcttcaggcagttcttggcggcaatg
aggcatttgatgacaatgattaaggttgctttcctgcttgtaattgagcttggggtgttc
cctttgatgtgtggatggtggctagatgtatgtacaataaggatgtttggaaaatcaatg
tctcaaagagttcagttcttctcagtctcacctttagcaagctcattgattcattgggtt
gtaggaattgtgtacatgctacaaataagcatctttgtcagccttcttcgaggggtttta
cgtaatggggttctatacttccttcgagacccggctgatccaaactacaatccgttccgt
gatttaattgatgatcctgtacacaagcatgctcggagggtcttgttatcagttgcagtt
tatgggagtttgattgtgatgctggtatttttgcctgttaaatttgctatgaggatgaca
ccctctattttcccactcgatatatcggtttcggacccatttacagagattccagcggac
atgcttctctttcaaatatgcattccatttgctgttgagcattttaaattgcggacgaca
atcaagtctcttctgcgccattggtttactgcagttgggtgggcattaggcttaaccgac
ttcttacttcccagaccggaggagaatggtgcccaggaaattgtcaatgtggaacaggga
caacaggatagactacagattgtgcaaggtgcacaggaacaggccatggttgcatttgct
gctgatgatgatccaaatagaggcctcgcatcagggaactctaatgctgtggaggaattt
gatggagatgaacaaaccgattcagacaagtacagttttgttcttcgcattgtcctgttg
ctggtcatcgcttggatcactttgcttgtattcaactctgccttgatagtagtaccgata
tcacttggacgtgctctattcaatgcaattcctcttctgccaataactcacggcattaag
tgcaacgacctttatgctttcgtcatcggaagctatttcatttggacagtcttggctggt
gctagatactccattgagcacataagaacaaagagggcttcagttctgttaggccaaatc
tggaagtggggtgtcattgtcatcaagagctccttgctattatcgatatggatttttatc
attcctgttcttattggcctgctttttgagcttttggtgattgtgccgatgcgggtgcct
gttgatgagagtccagttttcctcctttatcaagattgggcgctgggtctcatttttctg
aagatatggactagacttgttatgctggatcatatgatgccattggtagatgatagctgg
cgagtaaaattcgaaagggtgagagaagatggcttctccagactgcagggcctttgggtg
ttgcgggagattgtgtttcctatcataatgaagctgctgacagcgttgtgtttaccttat
gtattagcccgaggggtatttcccgtgcttggatacccattagtggttaactcggctgtc
taccgcttcgcgtggctgggatgcctttgccttagcttcttgtgcttttgtgctaagaga
tttcatgtctggttcactaacctccacaattctataagggacgacagatacctcatcggt
cgtcaacttcataacttcggggaagactctgaacaaaagcaaagtgagacaggaacttca
tctgagttaccgcagggcactggaataatccggcagcctgatcgtgatgctgatgttggg
ttgagattgaggcgtgttaattaa
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