Hibiscus syriacus (Rose-of-Sharon): 120208009
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Entry
120208009 CDS
T09559
Name
(RefSeq) pre-mRNA-splicing factor 38-like isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120208009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120208009
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120208009
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
120208009
NCBI-ProteinID:
XP_039063316
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MANRTDPAAKSIRGTNPQNLIEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTSFMCLVMKMLQIQPEKDIVVEFIKNDDYKYVRVLGAFYLRLTGIDSDIYRYL
EPLYNDYRKVRRKSPDGNFILAHVDEVIDELLTTDYSCDIALPRIKKRWTLESLGALDAR
KSVLEDDFEEEEEKDENEQDGLEEEVAHEKQDYYRGRSPARDRERDYRRDSQRHRDRDYD
RDRDYDRERGRGRERDRDRDRDRDRDRDHYRLREEKEYGYERDRDREREGRERDRRDRER
GRRRSRSRSRSRSRDRKRRARSSMSPRMRGAEDGKPPEESKKKKGKKEKDDGTDHLDPEI
AEANRIRASLGLKPLKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggatccggccgccaaaagcataaggggaacgaaccctcaaaacctt
atcgagaagattgtacgctcgaagatttaccagaatacctactggaaggagcagtgtttc
gggctgacggcggagacgctggttgacaaggcaatggagctggatcacatcggcggaact
tacggtggtaatcgaaagcccacttccttcatgtgcctcgtcatgaaaatgctccaaatc
caacccgaaaaggatatagttgtcgaattcatcaaaaacgacgattacaagtatgtaagg
gttctgggagctttttatttgcgtcttacggggattgattccgacatttatcgttattta
gagcctttgtacaacgattatcggaaagtaaggcgaaaatcacctgatggaaatttcatt
ttggctcatgttgatgaggtgattgatgaactcctcacaacagattattcttgtgatatt
gcgctaccgcgtattaagaaaaggtggacccttgaatcgcttggtgcactggatgcacga
aaaagtgtgctggaagatgattttgaggaggaggaagagaaggatgagaacgaacaagat
ggtttagaagaggaggtggctcatgaaaagcaggattattaccgagggagaagccctgct
agagatagagaaagagattatagacgggacagtcagagacacagggatcgggattatgac
agagatagagactatgatagagaaaggggacgtggccgtgagagggatagggacagggac
agggacagggacagggatagggatcattatcgcctgagagaggaaaaggagtacggctat
gagagggatcgagatagagaaagggaaggtagggagcgtgataggcgagacagggaacgt
ggcagacgaaggagccgttcaaggagtcgtagtaggagtagggacaggaagagacgtgct
cgcagcagcatgagtcctagaatgcgtggagcagaggatggcaaacctccagaagagtcg
aagaagaagaagggaaagaaggaaaaggacgatggaacggaccacctggatccagagata
gcggaagccaacaggattcgagcatcccttggtttgaaaccgttgaaattgtaa
DBGET
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