KEGG   Hibiscus syriacus (Rose-of-Sharon): 120208319
Entry
120208319         CDS       T09559                                 
Name
(RefSeq) DNA-directed RNA polymerase D subunit 2b-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120208319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsyr03021]
    120208319
Enzymes [BR:hsyr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     120208319
Transcription machinery [BR:hsyr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     120208319
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 120208319
NCBI-ProteinID: XP_039063546
LinkDB
Position
Unknown
AA seq 1196 aa
MGASPDGEGNGELSGTASGKFANGTYMDIDDDMFDDKFSVQELGEEFLRNFCKKTALSFF
NQYGLISHQINSYNDFIKHGLQDTFNSFGEFVIHSGYDPSKKGEGDWRHARVRFGKVTVD
RPTFWAVSGDKELNMLPRHARLQNMTYSSRVKVHVDLEVYTAKSVKSDKFKTGQEEMVEE
EVVYRDNREILIGRIPVMVRSDLCWLNEVEKGDCDFDYGGYFLIKGSEKIFIAQEQISLK
RLWISNVPGWTVAYRSEVKRNRFIIRLVENSKIEHIKGGEKILTVYFLSFEIPAWILFFA
LGVISDKEVVDLIGYGSYDSGISNILFASIQDADWRCPNFREGKNALNHLDKLRKETRFP
AEEGAEECLRRYMFPSLQGFKQKARFLGYMVKCLLQAHNGLRKCDNRDDFRNKRLGMAGE
LLERELKVHIAHARRRMSKSLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAWSHPY
KKMERISGVVANLGRANPLQTMIDLRKTRQQVSYTGKVGDARYPHPSHWGKVCFLSTPDG
ENCGLVKNLATTALVSTNVVEPIVDKLFDSGMEKVDNDTSSAVDGKDKVFLNGEWVGVCE
DSLFFATELRRNRRRKELPFQVEIKRDKHKGEVRIFSDAGRIMRPLLVVENLFKLKSFKG
KENYTFQSLLDQGIIELIAAEEEEDCCTAWDIKYLFADVEGKQPVKYTHCELDMSFLLSL
SCGIIPFANHDHSRRVLYQAQKHSQQAIGFSTTNPNIRVDTLSHRMYYPQRPLFQTMTAD
CLGKSGYPLGQNRMQPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASIERGMFRTEHVR
SYKAEVENTEIQERRRKPEDIVNFGKTESKIGRVDSLDDDGFPYIGASLQSGDIVIGRFA
ESGADHGVKLKHSERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG
FLESQENFPFTIQGIVPDMVINPHAFPTRQTPGQLLEAALGKGIACGGSMKYATPFSTLS
MDVITEQLHRAGFSRWGNERVYNGRTGEMVHSLIFMGPTFYQRLVHMSEDKVKFRNTGPV
HPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCKNCKNTAN
VIERSVAAGRKIRGPYCRVCQSGDGIVRVSVPYGAKLLCQELFSMGISLKFETQLC
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgggggcctctccggatggtgagggaaacggagaattgagtggtactgctagtggaaag
tttgcgaacggaacttatatggacatagatgacgatatgtttgatgacaagttcagtgtg
caagagctaggagaagagtttttgaggaatttctgtaagaaaacagccttgtcgttcttc
aatcagtacggtctcatcagccatcagattaactcctacaacgatttcatcaagcatggt
ctccaggacactttcaattcgtttggagaattcgttattcattccgggtatgacccgtcg
aagaagggagaaggtgactggcgtcacgctagagtcaggttcgggaaagtaaccgtcgat
aggccgacgttttgggctgtctccggcgacaaggagctcaacatgctacctaggcatgca
cgccttcaaaatatgacctattcttcgagggtgaaggttcatgttgatcttgaggtatat
acagcgaaaagtgtgaagagtgacaaatttaaaacaggacaagaagaaatggttgaggag
gaggttgtctatcgagataacagggagattctaattgggaggatccctgtgatggtaaga
tctgacctgtgttggttgaatgaggttgaaaagggtgattgtgattttgattatggaggc
tattttctgataaagggttcagaaaagatattcattgcacaagagcaaatttctttgaag
agactctggatttcaaacgtaccgggttggacggttgcttacaggtcggaggtgaagaga
aatagattcattattagactagtggagaattctaaaattgaacatatcaaggggggagag
aaaatcctgaccgtttatttcttgtcatttgagattcccgcgtggattttgttttttgcc
cttggtgtaatatcagacaaagaagttgtagatctgattggttatggaagctatgactcc
ggtatatcaaacatattgtttgcctcaattcaagatgctgattggagatgtcctaatttt
cgagaaggaaaaaatgctctgaaccatttggacaaattacgcaaggaaaccagatttccc
gctgaagaaggtgcggaagagtgccttagaaggtatatgtttccctctcttcagggtttc
aagcaaaaggctcgcttcttgggctacatggttaagtgtcttttgcaagctcacaatggt
cttagaaagtgcgacaacagagatgatttcaggaacaagaggttagggatggctggtgag
ttgcttgagcgtgaactgaaagttcacattgcgcatgcaaggaggcgaatgtcaaagtca
ctgcagagagatctttatgcagatcgtactgttcgtccaattgagcattatctggatgct
tccatagtcacaaatgggctctctagagcgttttctactggagcatggtcgcatccttac
aaaaagatggaaagaatttcaggtgtagtggcgaatctaggacgagcaaatccattgcag
acaatgattgatttgaggaaaacacgtcagcaggtctcatacactggaaaggttggagat
gcaagatacccacatccatctcattggggaaaagtttgtttcctctcgactccagacggt
gaaaattgtgggcttgtgaaaaacctggcaaccacagcacttgtgagtacgaatgtagtg
gaacccatagttgacaagttgtttgattctggaatggagaaagtggataacgatacatcg
agcgcagttgatgggaaagataaggtttttctgaatggggaatgggttggtgtttgtgaa
gattcccttttctttgccactgagcttagaagaaaccgacggaggaaagaattacctttt
caggtggaaattaaaagagataagcataaaggagaggtgcgcatcttttcggatgctggg
aggattatgcggcctcttttagttgtcgagaatttattcaaactaaaatcatttaagggg
aaggagaattacaccttccagtccctattagaccaggggataattgagctaattgcagcc
gaagaagaggaggactgttgtacagcatgggatatcaagtacctttttgcagatgttgag
gggaagcaacctgttaagtatacgcattgcgagcttgacatgtcttttcttttgagttta
agctgtgggatcattccatttgcgaatcatgatcattcaaggagagttctgtaccaggca
caaaaacattctcaacaggctattgggttttctacaacaaatccaaacatcagggttgac
acattgtcgcaccgaatgtattatccccaaagaccactctttcaaacaatgacagctgat
tgtctcggaaaatcaggatatcccctaggtcagaatagaatgcaaccaaagccagaattg
tacaacggccagaacgccattgtggctgtcaatgttcatcttggatacaatcaagaggat
tctttggtaatgaaccgagcatctatagagcgtggaatgttccgtactgaacatgtaaga
agctacaaagcagaagtagagaacacggaaattcaggagaggaggcggaaacctgaagat
attgtaaattttgggaaaacagaaagtaagatcggacgtgtggacagccttgatgatgat
ggttttccttatattggtgcgagtctgcagtctggtgacattgtcatcgggaggtttgct
gaatctggagctgatcatggtgtaaaactgaagcactctgaaagaggcatggttcagaaa
gttgtgctatcttcaaatgatgatggtaaaaattttgctgtagtatctctgagacaggtt
cgttctccctgtctcggagacaagttctcaagcatgcatgggcaaaagggtgtccttggt
tttctggagtctcaagagaactttccattcacgattcaaggaatagttcccgatatggta
attaacccacatgcatttcccacgagacaaactccgggtcaactcttggaggctgctttg
ggaaaggggattgcctgtggtgggtcaatgaaatatgccacccctttctccactctctcc
atggatgtcattacagaacagcttcatagggctggattttcaagatggggaaatgagaga
gtttacaatggtcgtacaggcgagatggttcattcacttatattcatgggtccaacattc
taccagcgtctcgtccacatgtcggaagacaaagtaaaatttcgcaacaccgggcctgtg
cacccacttacaaggcagccagttgctgaccggaaacgttttggtgggatcaaatttggt
gagatggaacgcgactgcctgattgctcatggtgcctcagccaacttgcacgagcgcctc
ttcacgcttagtgattcctcccagatgcatgtatgcaagaattgcaaaaacaccgcaaac
gttatcgaacggtcagtagctgccggccgaaagatcaggggaccctactgccgggtttgc
cagtccggagatggcatcgtacgagttagtgttccttatggagctaagctattgtgccag
gagctattcagcatggggattagtctgaaatttgaaacccagctttgttga

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