Hibiscus syriacus (Rose-of-Sharon): 120208329
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Entry
120208329 CDS
T09559
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsyr03009
]
120208329
Enzymes [BR:
hsyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120208329
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-60S particles
Helicases
120208329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
120208329
NCBI-ProteinID:
XP_039063560
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MAALSPPQQHEEKEPVSLSKKKRQKRKRTKHDPELERVDSLHWNSSLPNEEEDDAFSLFI
GSGDLDGGFLSLEEIDESEYGLDVPGAKKKINKKSKSKKQKLEDLTEGSGEDFEADPTEG
MAEEKNVKAKKKKKKSKKKKTKTVQQEDEHATVIDSKDTEEEEMPYGDEAYPEFYEWNEL
RLHPLLMKSISRIGFKEPTPIQRACIPAAAHQGKDVIGAAETGSGKTLAFGLPIFQRLLE
EREKAANMLEEKGEEAAKYAPKGVLRALIITPARELALQVTDHLKEFGKDINVRVVPIVG
GLSAEKQERLLKTRPEIIVGTPGRLWELISGGEKHLVELHSLSFFVLDEADRMVEAGHFR
ELQSIIEMLPMTIGATEGQSQNTENCVTVSSVSRKKRQTFVFSATLALSADFRKKLKRGP
LKSKQSTEGLNSIEILSERAGMKPNAAIVDLTNASILAKNLEESFIECREEDKDAYLYYI
LCIHGEGRTIVFCTSIAALRHISSILRILGINVSTLHAQMQQRARLKAIDRFRANGHGIL
VATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASSDGCSIALISPNDSAKFAS
LCKSFAKESIKRFPLESSYMPEVLKRLSLARQIDKISRKDSQERANKSWLERSAESLELV
VENYDSEEERVKNFKQKKASSVHLKKLQQELSGLLSRPLRPKTFSHRYPTAAGVTHLIQH
QFEELAKKNGDDNLVSGETKRRKMVVIGQDCIEPLQALRSAGREVLMDGKDMAQKRRNVE
SLRRKRKEEKKCLRDQRRKQKKLFERRQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctttcaccgccgcaacaacatgaagaaaaggaaccggtttcactttcaaag
aagaaaaggcaaaagagaaagagaacaaaacatgaccctgaactggaacgagtcgactcg
ctccattggaactcttcccttcccaacgaagaagaagatgacgccttctctctcttcatt
ggctctggggacctggatggaggctttctttcccttgaagagattgatgaatctgaatat
ggtttagacgtgcctggagctaagaagaaaattaataaaaaatcaaaatcaaagaaacaa
aaacttgaggacctcactgagggttctggtgaagattttgaagctgaccccacagaagga
atggcagaggagaagaatgtgaaggccaaaaaaaagaaaaagaagagtaagaagaaaaag
acaaagactgttcaacaagaggatgagcatgcaactgttattgatagcaaagacactgag
gaagaagagatgccttatggagatgaagcttaccctgaattttatgaatggaatgaattg
agacttcaccctctgcttatgaaatcaatatctcgaattggtttcaaggaacctactcca
atacagcgagcttgtattcctgctgcagctcatcaaggaaaggatgttattggtgctgct
gagacgggatctgggaaaacactagcctttggcctgcccattttccaacgtctcttagaa
gaacgagaaaaagctgcaaacatgcttgaggagaaaggggaggaagcagcaaagtatgct
ccaaaaggtgttttgcgagctcttatcattactcctgctagggaacttgccctccaggtt
accgatcatcttaaggaatttggcaaggatatcaacgttagagtggttcctattgttggt
ggcttgtccgcagagaagcaggaaagactattaaaaacaaggcctgaaataattgttgga
actccagggagattatgggagcttatctcagggggagaaaaacatcttgttgagttgcat
tcattatctttctttgtattggatgaggctgatcgaatggttgaagcgggacattttcgt
gagttacagtcaataattgaaatgctccctatgaccattggtgctaccgaaggacaatca
caaaatacagagaattgtgttacagtttcaagcgtatcaaggaaaaagagacaaacattt
gtgttttcagcaactttagcactttctgctgattttcgtaagaagctgaagcgtggtcca
ttaaaatccaagcagtccacagaggggctgaattctatagaaattctatctgagcgagca
ggaatgaaacccaatgctgccattgttgatttgacaaatgcatcaattttagcaaagaac
cttgaggaatcttttattgaatgcagggaagaagataaagatgcctatctgtattacatt
ttgtgtattcatggagaagggagaacaattgttttttgtacatcaattgcagctttgcgt
cacatttcttcaatattgcgcatccttggcatcaatgtttcaacacttcatgctcagatg
cagcaacgagctcgcttgaaggccattgaccgttttcgtgcaaatggacatggtattctt
gttgccactgatgttgcagcaaggggccttgatattcccggtgttcgaactgttgtccac
tatcaacttcctcattcagcagaggtttatgtccatagaagtggaagaactgctagagct
tcttctgatgggtgcagcattgctcttatctcaccaaatgattctgcaaagtttgcctct
ctttgcaaatcatttgctaaggaaagcatcaaacgatttccattagagagctcatacatg
ccagaggtcttgaaacgtttatctctagcacgccaaatcgacaagatctcacgtaaagac
tctcaggaaagggcaaataaaagctggttggaacgtagtgcagagtctttagagttagtt
gttgaaaattatgacagcgaggaggaaagagtgaagaacttcaagcaaaagaaagccagc
tctgttcacttgaagaaattacaacaggaactcagtggattactttcacgaccactacgt
ccaaaaacattttcacatcgctatccaactgcggctggtgttacacatcttatacagcat
caatttgaagaattggctaagaaaaatggagatgacaacttagtttcgggtgaaaccaag
agacggaagatggtggttatcggccaagattgcatcgaaccactacaggcacttcggagt
gccggtcgcgaggtgctcatggatggaaaagacatggcacaaaaacgaagaaatgtcgag
agtttgagaagaaaaaggaaagaggagaagaaatgtttacgtgaccagcgtagaaagcag
aagaaactattcgaaagaagacagtga
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