Hibiscus syriacus (Rose-of-Sharon): 120209654
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Entry
120209654 CDS
T09559
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120209654
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120209654
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120209654
NCBI-ProteinID:
XP_039064531
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All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MAIPSLSLFFLFASLPFISSSPVKDPELVVRDLNRAINVSRRNLRHASCGTGNPIDDCWR
CDPHWWKNRRRLADCAIGFGKNAIGGRDGKLYTVIDSSDNDPVNPKPGTLRHAVIQEEPL
WIVFAGDMTIKLKEELIMNSFKTIDGRGVDVHIAGGPCITIQFVTNIIIHGLNIHDCKQG
GNAMVRDSPRHYGWRTTSDGDGVSIFGGSHIWVDHNSLSNCKDGLIDAVYGSTAITISNN
YMSHHDKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEM
YAIGGSANPTINSQGNRFTAPNNIFSKEVTKHEDAPESEWKRWNWRSKGDLMVNGAFFTP
SGGGSSSSYAHASSLGARPSSHVATITTDAGALKCKKLSRC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccttcactttctctgttcttcctcttcgcctcccttcctttcatttcctct
tccccagttaaggaccctgaactcgtagttagagatcttaacagggccattaatgtctct
aggaggaaccttaggcatgcctcttgtggcactggcaaccctatagatgactgctggaga
tgtgaccctcactggtggaagaaccgacggaggctagccgattgtgcgatcgggttcgga
aagaatgccatcggcggaagagacggtaaactatacactgtcatcgattccagcgacaat
gaccctgtaaaccctaaacccggaactttaagacatgctgtgatccaagaagaaccattg
tggatagttttcgctggtgatatgaccataaaattgaaagaagaactcatcatgaactct
ttcaagacgatcgacggccgaggcgtcgatgttcacatagccggtggtccgtgcattacc
attcagtttgtcaccaacatcatcatccatggattgaacattcatgattgtaaacaagga
gggaatgctatggtgagggactccccgcggcactacggttggcggaccacatcggacggc
gacggggtttccatcttcggcggtagccatatttgggtggatcacaactctttatcaaac
tgcaaggatgggctgattgatgccgtttatgggtccactgcaatcaccatctcaaacaac
tacatgagtcaccatgataaggtcatgttgttagggcacagtgattcctacactcgagac
aagaacatgcaggtcactatagcttttaatcactttggcgaagggcttgtccaaagaatc
ccaaggtgtaggcatggttacttccatgtggttaacaatgactacacccactgggaaatg
tatgctataggagggagtgctaatccaaccatcaacagccaggggaataggttcactgca
ccaaataacatattcagcaaagaggtgaccaagcatgaagacgcgccggagagcgaatgg
aagcggtggaattggagatcgaaaggcgacctgatggtgaacggggcttttttcacgcca
tcgggcggcggttcgtcgtcgagttacgcccatgcctctagcttgggtgctaggccatcg
tcgcacgttgccacgataacgaccgatgccggtgctctcaagtgtaagaaactctctcgt
tgttga
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