Hibiscus syriacus (Rose-of-Sharon): 120209820
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Entry
120209820 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120209820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120209820
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120209820
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
HECT type E3
120209820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
Motif
Other DBs
NCBI-GeneID:
120209820
NCBI-ProteinID:
XP_039064652
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MGSRGQKRTEIADELPADKRACSSLEFRPSSSNCSSIRTHLNSPISTPDGDMETSSSASG
SIRSDGEHDKEEDSGFGSCDSDDAEQQPRHHILRDYQRRRSSDHGKLSSILSNLNEEGNG
GSGQLAALTELCQVLSFCNEDSLSGLMADSLSPILVKLVKNESNANIMLLATRGMTYLCD
VYPRSSGFLVKHDAVPALCERLLAIEYVDVAEQCLQALEKISRDQPLACLQAGAIMAVLN
FIDFFSVSVQRVALSTVVNICKRLPSEETACFAEVVPKLCVLLQHEDQQLVESVATCLIK
ISERMCQSSELLEELCKHELINQVIHLMKLNSRTTVSQPIYNGLIGLLAKLSSGSFVAFR
NLYELNISSSLKVVLSTYELSHGISSPHLVDGNCNQVHEVLKLLNELLPTSTGDQANRVV
LDKESFLADHHDHLQRFGMDLFSMLVQVVNSCANIYVCYGCLSVIRKLVFLSKPDILAEL
LKTANIPSFLAGVFTRKDHHLLMLALQIAEIILQKLSNVFLNSFVKEGVLFAIDALLMPE
KCSQLMLPVFSGIQPSFDSNQKSSAMEFQRCLCYAFDTMPSSSVPPCKIDKDTICNLAEH
IKTNYFAPELVESDKGMTDVLKNLRTFSAALINLIDMPVDGDTPAQHEEKFYSTLNQIIL
KLNGREPVSTFEFIESGIVKSLMHFLSDGLYMRENVEFIGSYDHLVVLGKRFQFFAKLFF
SYSDILVEYLPVSILIQKLQSALSSLENLPVISSHGFKQRNSFATVPNGRCVMYPCFRVR
FVRGEGETCLSDCAEDVVSVDPFSSLDAIEGYLWPKIFTKRTENGDLNAETLEQRDILPN
LLPSHANSSQGESSGFIDSMSTDLPEIQEDETNLSQMTSEQVHFRESNSGETMSLDETNM
GSVGKEQEFPTESTIAMETPCSASGRNDIEDLSPRLLLYLEGHQLGRTLTLYQVILQQLL
NSESEFMTWSKLWSRVYTITYKKAVESKQDDPQERPYVEDNSSMSDKKIASMQNMTFFSS
MFASNIASDLNKSSPIYDILFLLKILEGINRYSFHLMSCERICAFAEGRIDNLDNLKEMM
VHSVPQNEFVSSRLTGKLEQQMRDAFTLSTGGMPSWCNDLMSSCPFLFGFEAKCKYFRLT
AFGPRRVQHNANSRSNSGASNERQTTSGGLPRKKFLVSRDQILDSATKMMDLHAHHKGLL
EVEYDEEVGTGLGPTLEFYTLVSHEFQKPGLGMWREDHSSTITSKTFPTDSVILRSNFGL
FPCPCSPKSDSCSGIQFSEVLKKFVLLGQIVAKAIQDGRVLDVPFSKAFYKLILGQDLSL
FDIQSFDPELGRTLLEFQAIVNRKRHLESICVENSSLNXDLYFRNTKIEDLYLDFTLPGY
PDYVISSKCNHKVVNLDNLEDYIELVVDATINSGIARQIEAFKSGFNQVFSSSHLHIFTE
KELERLLCGECDYWGFNELLEHIKFDHGYTASSPPIINLLEIIQEFEFAQRRSFLQFVTG
APRLPPGGLASLNPKLTIVRKHSSNCADTELPSVMTCANYLKLPPYSSKEKMKEKLLYAI
TEGQGSFHLS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcgagggcagaagcgaacggaaatagccgacgaactgccagcagataagcga
gcttgtagttcattagagtttcgaccaagttcctccaactgttcctcaatccgaactcac
ctcaattcaccaatttccactccagatggtgatatggaaacttcctcttctgcctcgggt
tccatccgatccgatggtgaacacgacaaggaagaagattcaggtttcggatcatgcgat
tctgatgatgccgagcaacaaccacggcatcacattttaagagattaccagagaagaaga
tcaagtgatcatgggaaattgagcagtattttgtcaaatttgaacgaagaaggaaatgga
ggttctggtcaactggctgcgttgactgaactttgtcaagtgctatctttttgtaatgag
gattcgctttcgggtttgatggcggattctttatctcctatacttgtaaagcttgtgaag
aatgagagtaatgctaatataatgttgttggcgactaggggtatgacttatttatgcgat
gtctatcctagatcatctggtttccttgttaagcacgatgcagttcctgccctttgtgaa
agattattggctattgaatatgtggatgtagctgagcagtgtttgcaagcattggagaaa
atatctcgtgatcaaccgcttgcttgtttacaagctggtgcaattatggctgttctaaat
tttatagattttttctcagttagcgtgcagagagttgcactttccactgtggtgaacatt
tgtaagagacttccttcagaggagactgcatgtttcgctgaagtggttcccaaattatgt
gttttacttcagcatgaggaccaacagcttgttgagagcgttgcaacttgcttgatcaaa
atatctgagagaatgtgtcagtcttctgaacttctggaggaactttgtaagcatgagctg
attaatcaagtcatacaccttatgaaattgaacagccggactactgtatcccagccaata
tacaatggcttgataggattacttgccaagctttcttctgggtcttttgtagcttttagg
aatctctatgagctaaacataagcagctcgctgaaagttgtcttgtctacttatgaactc
tctcatggaatatcttctccacatttggttgatggcaattgcaatcaggtacatgaagtt
ctgaaattgctcaatgagctgcttcctacctccactggagatcaagctaatcgggtagtg
ttggataaagaatcatttttagctgatcaccatgatcatctgcaaagatttggaatggat
ttattttcaatgctggtccaggtagttaattcgtgtgcaaacatatatgtttgctatggg
tgcttatctgttatcaggaagttagtttttctgagcaaacctgacattcttgctgaattg
cttaagactgccaacattccaagtttcctggctggagtgtttactcgaaaggatcatcat
ttgctgatgttagccctacaaattgctgagatcatcctccaaaagctttctaatgttttt
ttgaactcattcgtaaaggagggtgttctttttgcgatcgatgcactactaatgcctgaa
aaatgctcgcaacttatgcttccagtgttcagtggtatccaaccatcatttgattcaaac
caaaagtcttctgcaatggagttccagagatgcttgtgctatgcatttgatacaatgcca
tcttcctctgtgccaccttgtaagattgacaaggatactatttgcaatcttgcagaacat
ataaaaaccaattactttgctccagaattagttgagtctgacaaaggaatgactgatgtt
cttaaaaaccttagaaccttctctgctgccttgattaatttgatagacatgcctgtcgat
ggtgatactccagctcaacatgaagagaagttctacagcacattgaatcaaattatactg
aagctcaacggcagagaacctgtttccacttttgaatttattgaaagtggaattgtgaaa
tcgcttatgcatttcctatccgatgggctgtacatgagggagaacgttgaatttattggt
agttatgatcatttggttgttttgggaaagaggtttcagttcttcgcaaagttgtttttc
tcttattcagatatccttgttgagtacttgccagtgtcaatactaatacagaaactacaa
agtgcattgtcatctttggaaaatctccctgttatttcaagccatggattcaagcagagg
aattcttttgctacagttccaaatggacgttgtgttatgtatccatgttttagggttcgt
tttgtgaggggggaaggggagacctgcctctctgactgtgcagaagatgttgtgtctgtt
gaccctttttcttcattagatgccattgaaggatatctttggcctaaaatttttactaaa
cgaacagaaaatggggatttaaatgcagaaacattggaacagagggacattctacctaat
cttttaccatcacatgcaaattctagtcaaggggagagttcaggttttatagacagcatg
tccactgatttgccagagattcaggaagatgagactaacttgtcacaaatgacctctgaa
caagttcatttcagagaatcaaattctggtgaaacaatgtctttggatgaaaccaatatg
ggctctgttgggaaggaacaggagtttcctacagagtcaactatagcaatggaaactccc
tgttctgcatctggtagaaatgacattgaagatttgtcaccaagactattgctttatcta
gaaggacatcaactaggccgaactttgacgctatatcaagtgattcttcaacagctacta
aattcagagagtgaatttatgacatggtctaagttgtggagcagagtatacacaataaca
tacaaaaaggctgtggaatctaagcaagatgatcctcaggaacgtccatatgtagaagac
aattcttcaatgtcagataaaaagattgcttctatgcagaatatgacatttttttccagc
atgtttgctagcaatattgcttctgatttgaacaagtcgagtcctatttatgatatactg
tttctgctcaaaattttggaaggcatcaacagatattcatttcatctaatgtcttgtgag
agaatatgtgcatttgctgaaggaaggattgataacttggataatttgaaggaaatgatg
gttcattcagttcctcaaaatgagttcgtgagcagtagattgacaggaaaattagaacaa
cagatgcgggatgcttttactttgtcaactggtggtatgccttcatggtgtaatgattta
atgtcttcttgtcccttcttgtttggctttgaggcaaaatgtaagtacttccgattgaca
gcctttggtccacgaagagttcaacataatgccaattcacgtagtaattcaggcgcttca
aatgagaggcaaactacttcaggtggtttgcctcgtaagaaatttttagtctcgcgtgat
caaattctagattctgcgaccaaaatgatggacctacatgctcatcacaagggacttctt
gaagtggaatatgatgaagaagttggcactggattgggtccaactttggaattctatact
cttgttagtcatgaatttcagaaacctggtcttggcatgtggagggaggaccatagttca
actatcacttcaaaaacctttcctactgattccgtaatcctaagaagcaattttgggctt
ttcccttgtccatgttcacctaaatcagactcatgtagcgggatacagttttctgaagta
ttaaaaaagtttgttcttttgggccaaattgttgcaaaggctattcaagatggaagagtc
ctggatgttcccttctccaaagccttctacaaattaattttgggtcaggaccttagtttg
tttgacatccaatcatttgaccctgagcttggtaggacgttactggagtttcaggctatt
gttaatcggaaaaggcatctggaatccatttgtgttgaaaactcttcattgaacnaggat
ttgtactttcgaaataccaagattgaagacctttatctggactttacccttcctggttat
cctgattatgttatttcatccaagtgtaatcacaaagtggtaaatttggataacttggag
gattatattgagcttgttgtggatgctaccataaatagtggcattgccagacaaattgaa
gctttcaagtctggatttaaccaggttttttcaagtagccatctccatattttcacagag
aaggaactagaacgtttactctgtggagaatgtgattattggggcttcaatgaacttctg
gaacatatcaaatttgatcacggatataccgccagcagtccacccatcattaatctactg
gaaattattcaagagtttgaatttgcacaacggcgatcatttctgcagtttgtgaccggt
gcaccccggctacctccaggaggtttggcatccttaaacccaaaattgacaattgtccgc
aagcatagcagcaactgtgctgatactgaactgcccagtgtcatgacttgtgccaattac
ctgaagttgcctccatattcttcgaaagagaagatgaaagagaaactcttatacgccata
acagaagggcaaggctcattccacctttcatag
DBGET
integrated database retrieval system
