Hibiscus syriacus (Rose-of-Sharon): 120210372
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Entry
120210372 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome E-like
KO
K12123
phytochrome E
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120210372
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
PAS_4
HATPase_c
PAS_9
PAS_3
Motif
Other DBs
NCBI-GeneID:
120210372
NCBI-ProteinID:
XP_039065058
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MEAWSGERTRPAKQQKPNTALSSSAASNLKPMDKGKVIAQYNADAGLMAEFEQSVVSGKS
FNYSKSVLCAPQSVPDEQVTAYLSRIQRGGLVQPFGCMIAIEEPSFGIIGYSENCFELLG
LRLDSEDESKGLKGLIGIDAKSLFTPASGASLAKAAASREISLLNPISVYSRSNQKPFYA
ILHRIDVGIVIDLEPARLGDHALSLSGAVHSQKLAVQAIARLQSLPGGDIGVLCDTVVED
VQKLTGYDRVMVYKFHDDGHGEVVSEIRRSNLEPYLGLHYPATDIPQATRFLFKQNRVRM
ICDCHASPVKVIQSDELKQHLCLVNSTLRSPMDVTQYMANMGSTASLVMAVVINGNDSTK
LWGLVVCHHSSPRYVPFPLRYACEFLMQAFGMQLYMELQLASQLTEKKILRTQTLLCDML
LRDAPFGIVTQSPNIMDLVKCDGXALYYGGKCWLLGVTPTKSQVKDIAEWLLTTHEDSTG
LSTDSLADAGYPSAALLGDAVCGMATARIISKDFLFWFRSHTAKEVKWGGAKHHPEDKDD
GGRMHPRSSFNAFLEVVKSRSLPWEIPEINAIHSLQLIMRHSFQNMEESVSKVLVYGQQN
ETEMQGINELSSVTHEMVRLIETGTAPVFGVDAAGLINGWNAKITELTGLQADDALGKSL
VDEVVHEDSHDLFKNLLGRALQGEEDKNVELKLRNFGLHPKNSVVYIVVNACTSRDYTND
VVGVCFVGQDVTSERVVMDKFIRLQGDYRAIVQSLSPLIPPTFASDENACCSEWNAAMEK
LTGCNRSEVIGKMLAGEIFGGLCQLKSQDSMTRFMILLYQGISGLDAKKLPFGFFDRKGN
FVEVYLTANKRTDANGNIIGCFYFLQVTEPGMQQASEHKQENKELFKKLKHLVYMRQEMR
NPLNGIRFTHKLLETTPISENQKQFLETSDACERQILTIIEDMDSGSIDEGSTELSMEEF
VLGNVLDTVVSQIMILLKERNLQLLHETPKEIKTLSLYGDRIRLQLVLSDFLFNVVHHAS
SLGGWVELKISPGIKLVRDGNEFVRLQFRMIHPGKGLPFTLIQEMNEGGNSWTTQEGLGL
NMSRKLLNKMNGRVQYVQEHNRSYFLIDLEIRTRKGRLKAPQAK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctggagtggagaaagaacaagaccggccaagcaacaaaaacccaacactgct
ttgtcttcatcagctgcgagtaacttgaaacccatggataaaggcaaggtcattgctcag
tacaatgcggatgctggtctcatggccgagtttgagcaatctgttgtttctggtaagtcc
tttaactattcaaaatcagttctttgtgctccgcaaagtgtgcccgatgaacaagtgacg
gcttatctgtcgagaatccaaaggggtggtctggttcagccctttggttgtatgattgct
attgaagaacccagttttgggatcattggctatagtgagaattgctttgagttgttgggt
ttgcgtttggatagcgaggatgagtctaaagggttgaagggtttgattgggatcgatgcg
aaaagcctcttcacgcctgcatcaggtgcttccttggctaaagcggcggcatcgagggag
atttcgttgttgaatccgatttcggtttattctaggagcaaccagaagcctttttatgct
atattgcataggattgatgtggggattgtgatcgatttagagcctgcgcggttaggtgat
catgcactgtcgctttccggtgccgtgcactcgcagaaactcgccgttcaggcaattgcc
aggttgcagtcgcttcctggtggtgatatcggtgtgttgtgtgatacggttgtggaggat
gttcagaaacttaccggctatgacagggttatggtgtacaagttccatgatgatggtcac
ggtgaagtcgtgtcggaaatcaggaggtcgaatttggagccgtacttgggtttgcattat
cctgcaacggatatacctcaagccactcgcttcttgttcaagcagaatcgtgtgaggatg
atctgcgattgccatgcgagtccagttaaggtcattcaaagtgatgagttgaagcagcat
ctctgcttggtgaattcaacccttaggtctcccatggatgtcacacagtacatggcaaat
atgggctcgaccgcctcgttagtaatggcagtcgttataaatggcaacgattcgacgaag
ctttggggactggttgtctgtcaccatagttctccacgctatgtgcctttcccgcttcgt
tatgcctgtgaatttcttatgcaggcatttggaatgcagctatacatggaactccaatta
gcatcacaactaaccgagaagaagattctaaggactcaaaccttactctgtgatatgctg
ctccgtgatgccccgtttggtatcgtgacacaatcgcctaatatcatggaccttgtgaag
tgtgatgggnctgcactgtactacggaggaaaatgttggttgctaggtgtgactccaacc
aagtcacaggtaaaagatatagctgaatggctgctcaccactcatgaggattctactgga
ttgagtaccgatagtttggccgacgctggctaccccagtgctgctttactgggtgatgca
gtttgtggcatggctactgcccgaatcatttccaaggatttcttgttctggttcaggtct
catactgcaaaggaagtgaaatggggaggagccaagcatcacccggaagacaaggatgat
ggtggaagaatgcatccgagatcctcgtttaatgcttttcttgaagtggtgaaaagtaga
agtttgccttgggagattccagaaattaatgctattcactctttacagcttataatgaga
cattcatttcaaaacatggaagagagtgtctccaaggtgttagtttatggccagcagaat
gaaaccgagatgcagggaatcaatgaactcagctcagtgacacacgaaatggttagattg
attgagactggaacagctccagtatttggagttgatgcagctggtctcataaatggttgg
aatgcaaaaatcacggagttgacaggtttacaagccgatgatgcactcgggaaatccctg
gtcgatgaagttgttcatgaagattcacatgacctgtttaagaatctcctaggaagagct
ttgcaaggtgaggaggacaagaatgtcgagttaaagctcagaaatttcgggcttcatcca
aagaactcagttgtttatatcgtggtgaacgcctgcacaagcagggattacacaaatgat
gtcgttggtgtgtgttttgtgggtcaagatgttacttctgagagagttgtgatggataaa
ttcatccgtttgcaaggagattacagagctatcgtacaaagtcttagccctttgatacct
ccaacatttgcttcagatgagaacgcctgctgttccgaatggaatgcggccatggaaaaa
ctgactggttgcaacagaagtgaggtcataggtaaaatgctggcaggagaaatctttggt
ggtttatgtcagctcaaaagtcaggactcaatgactagattcatgatcctgctgtatcaa
ggaataagcggcttggatgccaaaaagctcccattcggattttttgatagaaaaggaaat
tttgtggaggtttacttaacagcaaacaagcggactgatgccaatgggaacataattggt
tgtttctacttcttacaggtcactgagcctggcatgcagcaggctagtgaacacaagcaa
gagaacaaggagttgtttaagaaactcaagcacttggtttacatgcgacaagagatgaga
aatcctctgaacggtattagatttacacataaacttcttgaaactacacctatttccgaa
aaccagaagcaattcctcgagaccagcgatgcttgcgaaagacagatcttgacaataatt
gaggatatggactcgggaagcattgatgaagggagcacagagctaagcatggaagaattc
gttttagggaatgttcttgacaccgtcgtcagtcaaatcatgattttgctaaaagaaagg
aacttacaacttctccatgaaactccgaaggaaatcaaaacactatccctatacggtgat
cgaattaggctccagctagtcctatcggatttcctgtttaatgtggtgcatcatgcttct
tctctgggtggatgggtagaactcaagatttcacccggtataaagctagtacgagatggc
aacgagtttgttcgattacaattcaggatgattcacccaggtaaaggccttcctttcact
cttattcaagaaatgaacgagggcggaaatagttggacgacacaggaaggactagggctg
aacatgtcgcggaagcttctgaacaagatgaatggacgagttcagtatgtccaggaacat
aacagaagttacttcctcattgatctcgaaatccgaacgaggaaaggaagactaaaagca
ccacaagcaaaataa
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