Hibiscus syriacus (Rose-of-Sharon): 120210530
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Entry
120210530 CDS
T09559
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsyr01009
]
120210530
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120210530
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120210530
Protein phosphatases and associated proteins [BR:
hsyr01009
]
HAD phosphatases
Fcp/Scp phosphatases
120210530
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120210530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
120210530
NCBI-ProteinID:
XP_039065173
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MMSMYKSVVYQGEEVLGEVEIYPQQHLREEDGGKLTVMMMEEEMKEIRIGYLTQGSERCP
PLAVLHTITSTGLCFKMESSKDNNYYSSSSQDTPPLHLLHSECIRDNKTAVMPMEDRELH
LVAIYSRNSDKPCFWAFNVARGLYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIE
ALQRKMNTEVDPQRAAGMMAEIKRYQDDKAILKQYAENDQVVENGKVIKIQSEVVPALSD
NHQPIVRPLIRLEEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT
MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFEDGICHPKMALVIDD
RLKVWDEKDQPRVHVVPAFAPYFAPQAEANNTIPVLCVARNIACNVRGGFFREFDEGLLQ
KIPEISYEDDIKDIPLPPDVGNYLVSEDDTSASTGNKDPLTFDGMADAEVEKRLKEAISA
ASTVSSSTLNLDPRLASSLQFTMPSSSSVPLPAAQTSMVSFPNMQFPQVAPVIEPVAPVV
APEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDATPPESAFPPARPAMQVPV
SRAQSRGSWFSADEEMSPQQLNRTVSKDFPLDSGRMHIEKHRFSPFFPKAESSIPSNRLR
ENQRLSKEAFHRDDRLGLNLTPSSYHSFSGVEMPLGRSSSSYKDLDFESGRTVPSGETPA
GVLQDIAMKCGAKVEFRPALVASMDLQFSVEAWFAGEKVGEGTGRTRREAQRQAAEDSIK
GLANTYLSLIKPDNGSARGDLRLANTNDNGFPGNLNLYGNQPLSKEESMSFSTAPEPSRL
LDPRLEGSRKYLGSVTALKELCMMEGLGVAFQAQSPSASNTLQKDEVYAQVEVDGQVLGK
GIGLSWEEAKMQAAENALGSLRSMLGGQFTQKRQGSPRSLQDMQSKRLKLDFPRGLQRMP
SSSRYHKNAPPVP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtatgtacaaatctgttgtatatcaaggggaagaagtgttgggagaggttgag
atttatccacaacaacatctaagggaagaagatggagggaaattaacggtaatgatgatg
gaagaagaaatgaaggaaatcaggatagggtatttgacgcaaggcagtgagagatgtccg
ccacttgcagtgttgcataccattactagtactgggctttgcttcaaaatggaatcttca
aaagacaacaactactattcttcttcctctcaggacacgcctccgcttcatcttttgcac
tcggaatgtatcagagacaacaagactgcagtaatgcctatggaagatcgtgagctccat
ttggttgcaatatattctaggaatagcgataaaccctgtttctgggctttcaatgttgca
aggggactttatgattcttgtcttgtcatgctgaacctaagatgtcttggaattgtattt
gatctggatgaaactctcgttgttgcaaacacaatgcgctcatttgaggaccgaatagag
gctttgcaacgaaagatgaacaccgaggttgatccacaacgtgctgcaggtatgatggca
gagattaagcgttatcaagatgataaagccatattaaagcagtatgcagagaatgaccag
gttgttgaaaatgggaaggtgattaagattcagtctgaggttgttccagccttatctgat
aatcaccaacctattgttcgaccgcttattcgattggaagagaaaaacattattctgaca
cgcatcaacccacagattcgtgatactagtgttcttgtgagattgagacctgcttgggag
gatcttcgaagctacttgactgcaagagggcgtaaacggtttgaggtttatgtttgtaca
atggctgaaagggattatgctttggaaatgtggaggctgcttgatcctgagtcaaatttg
atcaattcaaaagaattgttggatcgaattgtctgtgtcaaatctggtttgaggaaatca
ttattcaatgtctttgaagatggaatatgccatccaaaaatggcgttggttattgatgat
cgtttaaaagtttgggatgagaaagatcaacctcgcgtgcatgttgttccagcattcgct
ccttatttcgctcctcaagctgaagcaaataatactattccagttttatgtgttgcaaga
aacattgcatgcaatgttagaggtggttttttcagagaatttgacgaaggccttcttcaa
aaaattcctgaaatttcatatgaagatgatattaaagatattcctttacctccagatgtg
ggcaattatttggtctctgaggatgatacttctgcttctactggaaacaaagatccactt
acatttgatggcatggcagatgctgaggttgaaaaaagactaaaggaggcaatttcagca
gcatcaacagtctcttcatcaacccttaacctggatccaagactcgcttcttctcttcag
ttcaccatgccttcttctagttcagttccattgcccgcggctcagacatcaatggtatca
tttccaaacatgcagtttcctcaggtagcacccgtgattgaaccagtggctccagttgta
gccccagaaccaagcttgcaaagctccccggctagagaagaaggcgaggttccagaatca
gaattggatcccgatacaaggaggaggcttctgatattgcaacatgggcaagataccaga
gatgcaacaccacctgaatctgcatttccccctgcgagacctgcaatgcaagttccagtt
tcacgtgctcaatcacgtggtagttggttttctgctgatgaggagatgagcccacagcaa
ctgaaccgaacagtttccaaagattttcctttagattctgggcgaatgcatatcgagaaa
catcggttctctcccttcttccctaaggctgagagttctattccatcaaatagacttcgt
gaaaatcaaagattatcaaaagaggcatttcatagagatgatcgtttggggttaaacctt
acaccgtctagttatcattctttttcaggtgtggagatgccccttggtcggtcatcttct
agttacaaggatcttgactttgaatctggacgaactgttccaagtggagaaactccagcg
ggagtcttacaagatattgcaatgaagtgtggagccaaggtcgaatttagaccagctttg
gttgctagcatggacctgcaattctctgttgaggcttggtttgctggggagaaagttggt
gaaggaactgggagaacaagaagagaagctcagcgtcaggctgcagaagattctataaaa
ggcttagctaatacatatttgtcacttattaagcctgataatgggtctgcacgaggggat
ttaaggttggccaacacaaatgacaatggctttcctggtaatttgaatttgtacgggaac
cagccattgtctaaagaggaatctatgtcattttcaactgcaccagaaccatctaggctt
cttgatccaaggctggaaggctccaggaaatatctgggttcggtcaccgcacttaaagaa
ttatgcatgatggagggccttggggtagctttccaagcacagtcaccatctgcatcaaat
acattgcagaaagatgaagtatacgcacaggttgaagtagatgggcaggttttaggaaaa
ggtatcgggttatcatgggaagaggctaagatgcaggctgctgaaaatgcccttggaagt
ctaagatcaatgctcggaggtcaatttactcagaaacgtcagggttctccaaggtcattg
caagatatgcaaagtaaacgcttaaagctggattttccgcgaggtctacagcggatgcct
tcttctagtagatatcacaagaatgctcctcctgttccttga
DBGET
integrated database retrieval system
