Hibiscus syriacus (Rose-of-Sharon): 120210721
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Entry
120210721 CDS
T09559
Name
(RefSeq) homeobox-leucine zipper protein HDG2-like isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120210721
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
120210721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
HTH_Tnp_1
MRP-L20
Motif
Other DBs
NCBI-GeneID:
120210721
NCBI-ProteinID:
XP_039065351
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MPAGVMIPARNMPSMITGNGFGTSSSGLTLGQIMFQQPNNMMEGQLHPLEMTQNTSESEF
ARTRDEEFDSTNKFGCENHELGGSGDDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPD
DKQRKELGRELGLEPLQIKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRFREALS
TASCPNCGGPTAVGQMSFDEHHLRLENARLREEIDRISAIAAKYVGKPLANFPLLSSPAP
PRSFDFGAQPVSEEMYDVGDLLRSISAPSEADKPMIIELAVAAMEELIRMAQMDEPLWMA
SLDGSTCVLNEEEYIRTFPNGIGPKPTGLKSEASRETAVVIMNHINLVEILMDVHQWSTL
FSGIVSKASTLDVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRESYYVRYCKQHAEGTWA
VVDVSLDNIRPSPTVKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVSSS
HMFGARRWVATLDRQCERLASLLTSNIPAGEVGVITNQDGRKSMLKLAERMVISFCGGVS
ASTAHTWTTLSGTGADDVRVMTRKSIDDPGRPPGIVLSAATSFWLPVSPKRVFDFLREEN
SRSEWDILSNGGAIQEMAHIANGRDPGNCVSLLQVNSANSSQSNMLILQESCTDSTASFV
IYAPVDIVAMNVVLNGGDPDYVALLPSGFAIFPDGTDGGIADAGGSGGSLLTIAFQILVD
SVPTAKLSLGSVATVNNLIACTVERIKASLSCDNA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgccagccggagtaatgattccggcgaggaacatgccgtcgatgatcaccggtaacggt
ttcggaacatcatcctcaggacttacccttggtcagataatgttccagcagcctaacaac
atgatggaaggtcaacttcatcctcttgagatgacccaaaacacttccgaaagtgaattt
gctcgaaccagagatgaggagttcgacagcacgaacaaattcggctgcgaaaatcacgaa
cttggtggctccggggacgaccaagatcctcgtcccaacaaaaagaagcgttaccatcgc
catacccagcatcagatccaggaaatggaggcatttttcaaagagtgtcctcatccagat
gacaagcaaaggaaggagcttgggcgtgagttaggtttagaacctttgcaaattaaattt
tggttccaaaacaagcgtacccaaatgaagacccagcatgaacgtcacgaaaacacacag
cttcgaactgagaacgaaaagctaagggctgacaacatgaggtttagggaagctttgagc
actgcatcatgccctaattgtggaggtccaactgctgtaggacaaatgtcatttgatgaa
catcatctgagacttgagaatgctcgattaagggaagagattgatcgtatatcagcaata
gctgcgaagtacgttggcaagccactggcgaacttccctcttctttcttctcctgcacct
cctcgatcctttgatttcggtgcgcagcctgtctcggaggagatgtatgatgttggtgat
ctacttaggtcgataagtgcaccgtccgaggctgataagccgatgattatcgagcttgcg
gtggcagccatggaagaactaattagaatggctcagatggatgaacctctatggatggcc
agtcttgatggatcaacctgtgtgctgaatgaagaagagtatattagaacatttcctaat
ggaattggaccaaaacctactggcttgaaatccgaagcttcaagagaaactgctgttgtt
atcatgaaccacattaacctagttgagattctcatggatgtgcaccagtggtcaactttg
ttttcgggaatagtttcaaaagcttcaactttggatgttctctcaacaggagtagcaggg
aactataacggagcccttcaagtgatgtcagctgaatttcaagttccttcccctcttgtt
cccactcgtgagagttattatgtaaggtactgcaaacagcatgcagagggaacttgggct
gttgttgatgtttccttggataatatacgcccaagtcccactgtcaaatgcagaagaaga
ccatctggttgcctgattcaagaaatgcccaatggctactcaaaggttacatgggttgag
catgtagaagtggatgatagaggtgttcacagtctgtacaagcagctcgtaagctccagc
cacatgttcggagcacgacgatgggtggctactttagatcgacagtgtgagaggctcgct
agtcttttgacttcgaacattcccgccggtgaagttggggtcataacgaatcaagatggg
agaaagagtatgctgaagctagctgagcgaatggtgatcagtttctgcggtggagtgagc
gcctcgactgctcacacgtggacaacattgtcgggaaccggggccgacgatgtgagggtg
atgacacgaaagagtatagatgacccaggtagacctccagggattgtgcttagcgctgca
acttccttttggctccctgtttcgccaaagagggtatttgatttccttagagaagagaat
tctcgaagtgagtgggatattctttctaatggaggagctatccaagaaatggcacacatt
gcgaatggtcgggatccagggaattgtgtttcactgcttcaagtaaacagtgcaaattca
agccaaagcaacatgctgattttacaagagagttgcactgattcaacagcctcttttgtg
atctatgctcctgttgacatcgttgcaatgaatgttgtcctaaatggaggggacccagac
tacgttgcccttcttccctccggtttcgcaatatttccggatggaaccgatggtggcatc
gctgatgccggcgggtctggtggatctcttctaactattgcatttcagattttagtcgac
tccgtgccgacggctaaactttctctaggatcagttgcaaccgtgaacaatttgattgca
tgcaccgttgagaggataaaggcttctctgtcatgcgacaatgcatga
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integrated database retrieval system
