Hibiscus syriacus (Rose-of-Sharon): 120211218
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Entry
120211218 CDS
T09559
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120211218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120211218
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120211218
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
120211218
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120211218
NCBI-ProteinID:
XP_039065743
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MEIAPAVPPSSSLGDEIPTSSAEDAIADGVKPSPSTSSSSLEKDEKATSSTASTVSLAAL
ASKYGPDMEEEEEEEDVCRICRNPGDAGNPLRYPCACSGSIKYVHQDCLLQWINHSNARQ
CEVCKHAFSFSPVYAENAPARLPFQEFVVGMTMKACHVMQFFLRLSFVLSVWLLIIPFIT
FWIWRLAFVRSFGEAQRLLLSHASTTIILTGCLHGFLLSASIVFIFLGATSLRDYFRHLR
ELGGQDADREDEGDMNGARVARRPPGQANWNFAADGNGEDAVGAQGVGGDGQMIRRNAEN
VAARLEMHAARLEAHVEHMFDGLEDADAAEDVPFDELVGMQGPVFHLVENAFTVLASNMV
FLSVVIYMPFTLGRLILLYVSWLFSSASGPVLSAVMPVIDTTLSLANISLKNALTAVTNL
TPEGQGNSILGQVAEILNANSSAVGEISSNTSAPFSADVLKGASIGASRLSDVTTLVVGY
MFIFSLVFFYLGVVTLIRYTRGEPLTMGRLYGIASIVETIPSLFRKFLAAMRHLMTMIKV
AFLLVIELGAFPLMCGWWLDVCTIRMFGKSMSQRLQFFSFSPLASSLVHWVVGIVYMLQI
SIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVNKHARRVLLSVAVYGSLIVMLV
FLPVQLAMKIAPFIFPLDISVSDPFTEIPADMLLFQICIPFAIKHFKLRTTIKSLLHYWF
TTVGRALGLTEFLLPRPEENGGQENANVVPGQQDRPQVVQLGGQEQAMVAFVADDDPNRG
LLASGNSNVVEELDGDERTDSDRYGFVLRIVLLLVVAWMTLLIFNSSLIIVPISLGRALF
NAIPLLPITHGIKCNDLYSFVIGSYFIWTAIAGARYSIEHIRTKRAAVIFGQISKWSTIV
IKSSMLLSIWIFFIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLV
MLDHMMPLVDDSWRVKFERVREDGFSRLQGLWVLREIVCPIIMKLLTALCVPYVLARGVF
PVLGYPLVINSAVYRFAWLGCLCFSCLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFG
ENSEENQSKAGGCSEAQIYNPRGTAIIQRD
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggagatagcccccgcggttccgccttcttcttccctgggcgatgaaatccccacttct
tccgcagaggatgctatagcagacggcgtaaagccttcgccatccacgtcttcctcatca
ttggagaaggatgaaaaagcgacgtcatctacggcgtcaacggtgtcgttggccgcgttg
gcttcgaaatatggtcccgatatggaggaggaggaagaagaggaagatgtttgtaggatc
tgccggaatccgggagatgctggcaatccgcttcgatacccctgcgcttgtagcggcagc
ataaaatatgtccaccaggattgccttcttcagtggatcaatcacagcaacgctcgccaa
tgcgaggtttgcaagcatgcgttttctttctcccctgtgtatgctgagaatgccccagca
aggcttccttttcaggagtttgttgttgggatgacaatgaaagcttgtcatgttatgcag
ttctttttgcgtcttagttttgtgctttctgtctggcttctcataatacctttcattacc
ttttggatatggcggttggcattcgtcaggagttttggcgaagctcagagattattatta
agccatgcttctaccacaatcattcttactggttgtttgcatggattcctactttctgct
agcattgtgtttatttttcttggagcaacttctttgagggattattttcgacatttgcga
gagcttggaggacaagatgctgatagagaagatgaaggggatatgaatggtgctcgtgtt
gctaggcgaccccctggacaagctaattggaattttgccgctgatggtaatggtgaagat
gctgttggagcacaaggtgttggtggagatggtcaaatgatcagaaggaatgctgaaaat
gtggcagctcgtttggaaatgcatgcagctcgtcttgaagctcatgttgaacacatgttt
gatggtctggaagatgctgatgctgctgaggatgtaccttttgatgagcttgttggcatg
cagggtcctgtttttcatttggttgagaatgcattcaccgttctagccagcaatatggta
ttccttagcgttgtgatttatatgccttttacacttggccgccttattctcctttatgta
tcttggcttttctcttctgcaagtggtccagtgttgtcagcagtcatgccagtgatagac
actaccctttccttagcaaatatctcattgaagaatgcattaactgcagttacaaatttg
acacctgaaggccaaggcaatagcatacttggtcaagttgcagaaatcttgaatgcaaac
tctagtgcagtaggtgaaatttcaagcaacacaagcgcaccattttcagcagatgtcttg
aaaggagcaagtattggagcatcaaggttgtctgatgttacaactcttgttgttggatat
atgtttatattctctttagtcttcttctacctgggtgttgtcaccttgattaggtacact
aggggcgagcctttgacaatggggaggttgtatggaattgcttcgatagttgagacaatt
ccatccctgttcaggaaattcctggcggcaatgaggcatttgatgacaatgattaaagtt
gctttcctccttgtaattgagcttggggcttttcctttgatgtgtggatggtggctagat
gtatgcactataaggatgtttgggaaatcaatgtctcaaaggcttcagttcttctcattc
tcacctttagctagttcattggttcattgggttgttggaattgtgtacatgctacaaata
agcatctttgtcagccttcttcgaggggttttacgcaatggtgttctatacttcctacga
gacccagctgatccaaactacaatccctttcgtgatttaattgatgatcctgtaaacaag
catgctcggagagtcttgttatcagttgcagtttatggaagtttgattgtaatgctggta
ttcttgccagtccagcttgctatgaagatagcaccatttattttcccacttgatatatcg
gtttctgacccatttactgagatcccagctgatatgcttctctttcaaatatgcattcca
tttgccattaagcattttaaattgcggacaacaatcaagtctcttctccactattggttt
actaccgttggcagagcattaggcttaacagagtttttacttcccagacctgaggagaat
ggtggccaggaaaatgccaatgtggtacccggtcaacaggatagaccacaagttgtgcaa
ctaggtggacaggaacaggccatggttgcatttgttgctgatgatgatccaaatagaggt
cttctcgcatcagggaattctaatgtcgtggaggagcttgatggggatgaacgaactgat
tcagacaggtacggctttgttctccgcattgttctcttgctggtggtcgcctggatgaca
ttgctaatctttaactcttccttgataatagtaccgatatcacttggacgagctcttttc
aacgccattcctcttctcccaataactcatggcattaagtgcaacgacctctattctttc
gtcattggtagctatttcatttggactgccatagctggggctagatactccattgagcac
attagaacaaagagggcagcggttatatttggtcaaatttccaagtggagcacgatagtc
atcaagagttccatgctcttatcaatatggatttttttcattcctgttcttattggcctc
cttttcgagcttttggtgattgtgccaatgcgggttcctgtagatgagagcccagttttc
ctattgtaccaggattgggcattgggtctcatttttcttaagatctggactagactggtt
atgctggatcatatgatgccattggtagacgacagctggcgagtgaaatttgaaagggtg
agagaagatggattttctagactgcagggcctttgggtgttgcgggagatcgtatgtccc
attataatgaagctgctgacagccttgtgtgtaccgtatgtactagcccgaggcgtgttt
ccggtgctcggctacccattagtaatcaattcagccgtctaccgctttgcatggctagga
tgcctttgcttcagctgcttgtgcttttgtgcgaagagattccatgtctggttcacaaac
ctccacaattctataagggatgaccgatatcttataggtcgtcgacttcataattttggg
gagaactcagaagagaatcaaagcaaggcagggggttgctcggaagcacagatttataat
ccacggggaactgcaataatccagcgtgactga
DBGET
integrated database retrieval system
