Hibiscus syriacus (Rose-of-Sharon): 120211407
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Entry
120211407 CDS
T09559
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120211407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120211407
03009 Ribosome biogenesis [BR:
hsyr03009
]
120211407
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120211407
Ribosome biogenesis [BR:
hsyr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120211407
Pre-60S particles
120211407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
TPR_IMB1
IBN_N
TOR1L1_N
HEAT_MROH2B_C
HEAT_2
TPR_DNAAF5
TIP120
PSME4_C
DUF3689
Motif
Other DBs
NCBI-GeneID:
120211407
NCBI-ProteinID:
XP_039065878
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MAATGSAPWQPQEEGLKEICGLLEEQISPSSLADKSQIWQQLQYYSQFPDFNNYLVFILA
RAEDKSVEIRQAAGLLLKNNLSTAYKIMTPAHQQYIKSELLPCLGAADKHIRSTVGSIIT
VVVQLGGILGWPELLQALVNCLDSNDLNHMEGSMDALSKICEDIPQVLDSDVPGLAERPI
NIFLPRLFQFFQSPHASLRKLSLGSVNQYIMLMPSALYTSMDKYLHGLFAIANDPAAEVR
KLVCAAFVQLVEVHPSVLEPHMKNVIEYMLQVNKDADDEVVLEACEFWSAYCDALIPPAI
LREYLPRLIPILLSNMVYADDDESLIEAEVDESLPDRDQDLKPHFHTSRFHGSDDAEDDD
DDSFNIWNLRKCSAAALDALSNVFGDEILSTLMPIIQAKLAATGDEAWKDREAAVLALGA
VGEGCISGLYPHLSEIVAFLIPLLDDKFPLIRSISCWTLSRFSKYIVQDSGHQKGYEQFD
ATLMGLLRRILDTNKRVQEAACSAFATLEEEAAEELAPRLDVILQHLMCAFGKYQRRNLR
IVYDAIGTLADAVGGELNKPVYLEILMPPLIAKWHQVSNSDKDLFPLLECFTSIAQALGT
GFSQFAGPVFQRCINIIQSRQLAKVDPVSAGVQYDKEFIVCALDLLSGLTEGLGSGIESL
VSQSNLKDLLLQCCMDDASDVRQSAFALLGDLARVCPVHLHPRLSEFLDIAAKQLNTPKL
KETISVANNACWAIGELAIKIRQDISPIALSVISCLVPILQHAEQGLNKSLVENSAITLG
RLAWVCPDLVSPHMEHFMQSWCIALSMIRDDIEKEDAFRGLCAMVRANPSGALSSLVFMC
KAIASWHEIRNEELHNEVFQVLQSYKQMLRNGAWDQCMSALEPPVKDKLSKYQV
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactggaagtgccccgtggcagccacaagaagaggggttgaaggagatctgt
ggactgctggaggagcagatttcgccatcttctttggctgataaatctcagatttggcaa
cagcttcagtactactctcagttccctgacttcaacaactatctcgttttcatcctagca
cgagccgaggataaatcggtagagattcggcaagcggctggtttgctgctgaaaaataat
ctaagtactgcttataagataatgactcctgcacaccaacaatatataaagtcagaacta
ttaccctgcttaggagcagcagataaacacattaggtcaacggttgggagtattataact
gtggttgttcaacttggggggattttggggtggcctgagttgttgcaagctttggtaaat
tgtttggatagcaatgacctaaatcacatggaaggttctatggatgcattgtcaaagatt
tgtgaggatataccgcaagtgctggattcagatgtgcctgggttagctgaaaggcctatc
aacatatttcttcctcggttatttcagttttttcagtctccccatgcctctctgagaaag
ctgtcattgggttctgtaaaccaatatattatgttgatgccttctgccttatatacatcc
atggataaatacctccatggtttgtttgccatcgctaatgaccctgcagcagaagtgcgg
aaattggtttgtgcagcatttgttcagctagttgaagtccatccatctgttctggagccg
catatgaagaatgtaattgaatatatgttgcaagttaataaggacgctgatgatgaagtg
gtacttgaagcatgtgaattttggtctgcatattgtgatgccctaataccacctgcgatt
ttgagagaatatttgccacgtctaattccaattttgttgtcaaacatggtttatgcagac
gatgatgaatcacttattgaggctgaggtggatgagtctcttccagacagagatcaggat
cttaaacctcactttcatacatcacgatttcatggttctgatgatgcagaagatgatgat
gatgactcattcaacatatggaacttacgcaaatgcagtgcggcagctcttgatgctcta
tcaaatgtgtttggggatgaaattctctcaactttgatgcctattattcaggccaagcta
gctgctactggtgatgaagcctggaaagatagagaagctgctgttttggctcttggtgca
gttggtgaaggttgcatcagtggtctctaccctcatttgtctgagattgtggcttttcta
attcctcttttagatgataagtttcctctcataaggagtatatcttgttggacactttct
agattcagcaaatacattgttcaggatagtggtcatcaaaaaggctacgagcaattcgat
gcaactcttatgggtcttctgcgaagaatattggatactaacaagcgagtgcaagaggct
gcttgttctgcttttgcaacacttgaagaggaggctgctgaagagttggcaccaaggtta
gatgtaattctgcagcatcttatgtgtgcttttggcaaatatcagagacgaaaccttaga
attgtttatgatgctattggaactctagcagatgctgttggaggggaattgaataagcct
gtttatcttgaaattctgatgcctccacttattgcaaagtggcatcaggtttcaaattct
gacaaagatctctttccactgcttgagtgtttcacatccatagcacaggcattgggtact
gggttctctcaatttgctggtcctgtattccaaaggtgcataaatatcatccagagtcga
caattggccaaggttgatcctgtttcagctggggttcagtatgataaggagttcattgta
tgtgcgcttgatttactctctggactaacagaaggccttggtagtggaatagagagtttg
gtttcacagagcaatttgaaggacttgcttctgcagtgttgcatggacgatgcatctgat
gttcgacaaagtgcctttgcacttcttggggaccttgcgagagtctgccctgttcatttg
catcctcgtttgtctgagtttcttgatatagcagcaaagcaattgaatactcccaagtta
aaggaaaccatttcagtagcaaataatgcatgctgggctatcggcgagctagcaattaag
atacgtcaagatatttctccaattgctttgtcagtgatctcgtgtttggttccgatcctc
caacatgcagagcaggggctcaacaagtcacttgttgaaaatagtgcaattacactaggg
aggcttgcatgggtctgtccggatcttgtatcgccacacatggagcatttcatgcaatca
tggtgtattgctttgtctatgatacgagatgatattgagaaagaagatgcgttccgaggt
ttatgtgcaatggtcagggcaaatccatcaggggctctgagttcacttgttttcatgtgt
aaagctattgcaagttggcatgaaataaggaacgaagaactacataatgaagtttttcag
gtcttgcagagctacaaacagatgcttaggaacggggcgtgggaccaatgtatgtctgct
ttggagccacctgttaaggataaactttcaaagtatcaagtataa
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