Hibiscus syriacus (Rose-of-Sharon): 120211639
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Entry
120211639 CDS
T09559
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120211639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120211639
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120211639
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
HECT type E3
120211639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
Arm
Motif
Other DBs
NCBI-GeneID:
120211639
NCBI-ProteinID:
XP_039066065
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MGSRGQKRTETTDELPADKRACNSLEFRPSSSNCSSIRTHLNSPISTPDAEMETSSSASG
SIRSDGEHEKEEDSGYGSCDSDDAEQQPRHHILRDYQRRRSSSDHGKLSSILSNLNGGGN
GGSGQLAALTELCEVLSFCNEDSLSSLMVDSLSPILVKLVKIESNANIMLLAIRGMTYLC
DVYPRSSGFLVRHDAVPALCEQLLAIEYVDVAEQCLQALEKISRDQPHACLQAGAIMAVL
NFIDFFSISVQRVALSTVVNICKRLPPEGPARFAEAVPKLCVLLKHEDQQLVESVATCLI
KISERMCQSSELLEELCKHELINQVTHLMKLNSRTTVSQPIYNGLIGLLVKLSSGSFVAF
RNLYELNISSTLKDVLSTYDLSHGISSPQLVDGNCNQVHEVLKLLNELLPTSTGDQANQV
VLDKESFLADHHDHLQRFGMDLFPMLVQVVNSGANIYVCYGCLSVIRKLVFLSKPDILAE
LLKTANIPSFLAGVFTRKDHHLLILALQITEIILQKLSNAFLNSFVKEGVLFAIDALLMP
EKCSQLMLPVFSGIQPSFDSSQKSSARDFQRCLCYAFDTVPSSSVPPCKIDKDAVCNLAK
HIKTNYFAPELVESEKGMTDVLQNLRNLSAALINLIDMPVDGDTLAQHEAKFYSTLHQII
LKLNGREPVSTFEFIESGIMKSLIHYLSNGLYTRENVEFIGSCDLLGVLGKRFQVFAKLF
FSYSDILVEDLPVSILIQKLQSALSSLENLPVISSHGFKQRNSFATVPNGRCVMYPCFRV
RFVREEGETCLSDCADDVLSVDPFSSLDAIEGYLWSKIFTKRTEKGHLNAEALEQRDILP
NLLPSNANSSQGESSGFIDSTSADLPETQEDETNLSQMASEQVHFRELNSGETMSLDETN
MGSAGKEQEFPTESTKAMGTPCSASGSNDIKDLSPRLLLYLEGHQLGRTLTLYQVILQQL
LNSESEFITWSKLWSRVYTITYKTAVESKQDDPHGHTYVEDNSSVSDKKIASMQNMAFFS
SMFACNIASDLDKLSPIYDILFLLKILEGINRYSFHLMSCERICAFAEVRIDNLDNLKEM
VHSVPHNEFVSSRLTGKLEQQMRDAFNLSTGGMPSWCNDLMSSCPFLFGFEAKCKYFRLA
AFGPRRVQLNAISRSNSGASNDRQTTSGGLPRKKFLVLRDQILDSATKMMDLHARHKGLL
EVEYDEEVGTGLGPTLEFYTLVSHEFQKPGLGMWREDHSSIITTKTLLTDYVIPRSSFGL
FPCPYSPKSDSCSGIQFFEVLKKFVLLGQIVAKAFQDGRVLDVPFSKAFYKLILGQDLSL
FDIQSFDPELGRTLLEFQAIVNRKMHLESICVENSSLEQDLYFRNTKIEDLYLDFTLPGY
PDYVLSSECNHKVVNLDNLEDYIELVVDATIHSGIARQIEAFKSGFNQVFSISHLHIFTE
KELERLLCGECDNWAFNELLEHIKFDHGYTASSPPIINLLEIIQEFEFAQRRSFLQFVTG
APRLPPGGLASLNPKLTIVRKHSSNCADTELPSVMTCANYLKLPPYSSKEKMKEKLLYAI
TEGQGSFHLS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcgagggcagaaacgaacggaaacaactgacgaattaccagcagataagcga
gcttgtaattcattagagtttcgaccaagttcctccaactgttcctcaatccgaactcac
ctcaattcaccaatttctactcccgatgctgaaatggaaacttcctcttctgcctcgggt
tccatccgatccgatggtgaacacgagaaggaagaagattcaggttacggatcatgcgat
tctgacgatgccgagcaacaaccacggcatcacattttaagagattatcagagaagaaga
tcgtcgagtgatcatgggaagttgagcagtattttgtcaaatttgaacggaggaggaaat
ggaggttctggtcaactggctgcgttgactgaactttgtgaagtgttgtcattttgtaat
gaggattcgctttcgagtttgatggtggattctttatcacctatacttgtaaagcttgtg
aagattgagagcaacgctaatataatgttgttggctattaggggaatgacttatttatgt
gatgtctatcctagatcatctggtttccttgtaaggcacgatgcagttcctgctctttgt
gaacaattattggctattgaatatgtggatgtggctgagcagtgtttgcaagcattggag
aaaatatctcgtgatcaaccgcatgcttgtttacaagctggtgcaataatggctgttcta
aattttatagattttttctcaattagtgtgcagagagttgcactttcaactgtggtgaac
atttgtaagagacttcctccagagggtcctgcacgtttcgctgaagcggttcccaaatta
tgtgttttacttaagcatgaggaccaacagcttgttgagagtgttgcaacttgcttgatc
aaaatatctgagagaatgtgtcagtcttctgaactgctggaggaactttgtaagcatgag
ctgattaatcaagtcacacaccttatgaaattgaacagccggaccactgtatcccagcca
atatacaatggcttgataggattacttgtcaaactttcttctgggtcttttgtagctttt
aggaatctctatgagctaaatataagcagcacactgaaagatgtcttgtctacttatgac
ctctctcatggaatatcttctccacagttggttgatggcaattgcaatcaggtacatgaa
gttttgaaattgctcaatgagctgcttcccacctccactggagatcaagctaatcaggta
gtgttggataaggaatcatttttagctgatcaccatgatcatctgcaaagatttggaatg
gatttatttcccatgctggtccaggtagtaaattctggtgcaaacatatatgtttgctat
gggtgcttatctgttatcaggaagttagtttttctgagcaaacctgacattcttgctgaa
ttgcttaagactgccaacattccaagtttcctggctggagtgtttactcgaaaggatcac
catctgctgatattagccctacaaatcactgagatcatcctccaaaagctttctaatgct
tttttgaactcatttgtaaaggagggtgttctttttgcgatcgatgcactactaatgcct
gaaaaatgctcgcaactgatgcttccagtgttcagtggtatccaaccatcatttgattca
agccaaaagtcttctgcaagggatttccagagatgcttgtgctatgcatttgatacagtg
ccatcttcctctgtgccaccttgtaagattgacaaggatgctgtttgcaatcttgctaaa
catataaaaaccaattactttgctccagaattagtcgagtctgaaaaaggaatgactgat
gttcttcaaaacctcagaaacttatctgctgccttgattaatttgatagacatgcctgtt
gatggtgatactctagctcaacatgaagcgaagttttacagcacattgcatcaaattata
ctgaagcttaatggtagagaacctgtttccacttttgaatttattgaaagtggaatcatg
aaatcgcttatacattacctatccaatgggctgtacacgagagagaatgtggaatttatt
ggtagttgtgatcttttgggtgttttggggaagaggtttcaggtcttcgcaaaattgttt
ttctcttattcagatatccttgttgaggacttgccagtgtcaatactaatacagaaacta
caaagtgcattgtcatctttggaaaatctccctgttatttcaagccatggattcaagcag
agaaattcttttgctacagtcccaaatggacgttgcgttatgtatccatgttttagggtt
cgttttgtgagggaggaaggggagacctgcctctctgattgtgcagatgatgttttgtct
gttgacccgttttcttcattagatgccattgaaggatatctgtggtctaaaatttttact
aaacgaacagaaaaagggcatttaaatgcagaagcattggaacagagggacattctacct
aatcttttaccatcaaatgcaaattctagtcaaggggagagttcaggttttatagacagc
acgtccgctgatttgccagagacacaggaagatgagactaacttgtcacagatggcctct
gaacaagtgcatttcagagaattgaattctggtgaaacaatgtctttggatgaaaccaat
atgggctccgctgggaaggaacaagagtttcctacagagtcaactaaagcaatgggaact
ccctgttctgcctctggtagtaatgacatcaaagatttgtcaccaagactattgctttat
ctagaaggacatcaactaggccgtactttgacgctatatcaagtgattcttcagcagcta
ctaaattcagagagtgaatttataacatggtcaaagttgtggagcagagtatacacaata
acatacaaaacagctgtggaatctaagcaagatgatcctcatggacatacatatgtagaa
gacaattcctcagtatcagataaaaagattgcttctatgcagaatatggcatttttttcc
agcatgtttgcatgcaatattgcttctgatttggataaattgagtcctatttatgatata
ctgtttctgctcaaaattttggaaggcatcaacagatattcatttcatctaatgtcttgt
gagagaatatgtgcatttgctgaagttaggattgataacttggataatttgaaggaaatg
gttcattcagttcctcataatgagtttgtgagcagtagattgacaggaaaattagagcag
cagatgcgggatgcttttaatttgtctactggtggtatgccttcatggtgtaatgattta
atgtcttcttgtcccttcttgtttggctttgaggcaaaatgtaagtacttcagattggca
gcctttggtccacgaagagttcaacttaatgccatttcacgtagtaattcaggtgcttca
aatgacaggcaaactacttcaggcggtttgcctcgtaagaaatttttagtcttgcgtgat
caaattctagattctgctaccaaaatgatggacctacatgctcgtcacaagggacttctt
gaagtggaatatgatgaagaagttggcactggcttgggtccaactttggaattctatact
cttgttagtcatgaatttcagaaacctggtcttggcatgtggagggaggaccatagttca
attatcactacaaagaccttgcttactgattacgtaatcccgagaagcagttttgggcta
ttcccttgtccatattcacctaaatcagattcatgtagtgggatacagttctttgaagta
ttaaaaaagtttgtacttttgggccaaattgttgcaaaggcttttcaagatggaagagtc
ctggatgttcccttctccaaagccttctacaaattaattttgggtcaggaccttagtttg
tttgacatccaatcatttgaccctgagcttggtaggacgctactggagtttcaggctatt
gttaatcggaaaatgcatctggaatccatttgtgttgaaaactcttcattggaacaggat
ttgtattttagaaataccaagattgaagacctttatctggactttacccttcctggttat
cctgattatgttctttcatccgagtgtaatcacaaagtggtaaatttggataacttggag
gattatattgagcttgtggtggatgctaccatacatagtggaattgccagacaaattgaa
gctttcaagtctggatttaaccaggttttttcaattagtcatctccatattttcacagag
aaggaactagagcgtttactttgtggagaatgtgataattgggccttcaatgaacttctg
gaacatatcaagtttgatcacggatatactgccagcagtccacccatcattaatctactg
gaaattattcaagagtttgaatttgcacaacggcgatcatttctgcaatttgtgaccggt
gcaccccgtctacctccgggaggtttggcatccttaaaccccaaattgacaatcgtgcgc
aagcatagcagcaactgtgctgatacagagctgcccagtgtcatgacttgtgccaattac
ctgaagttgccgccgtattcttcgaaagagaagatgaaagagaaactcttatacgccata
acggaagggcaagggtcattccacctttcatag
DBGET
integrated database retrieval system
