Hibiscus syriacus (Rose-of-Sharon): 120211858
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Entry
120211858 CDS
T09559
Name
(RefSeq) oligouridylate-binding protein 1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120211858
03041 Spliceosome [BR:
hsyr03041
]
120211858
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120211858
Spliceosome [BR:
hsyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120211858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_10
RRM_7
RRM_occluded
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
120211858
NCBI-ProteinID:
XP_039066256
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MQQQQGLNQQQQAMMQQALYHHPSFFTSPQIEPILSGNLPPNFDAATCRSVYVGNIHPQV
SEPLLQEVFSSTGPIEGCKLIKKDKSSYGFVDYFDRRSASLAIVTLNGRHLFGQPIKVNW
AYASSQREDTSGHHNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFV
SFRNQQDAQSAINDLNGKWLGSRQIRCNWAAKGANSNDGNAKSVVELTNGASEGQEKSND
DAPENNPLYTTVYVGNLAPEVTSADLHSHFHSLGVGTIEDVRLQRDKGFGFVRYSSHEAA
ALAIQMGNAQILFGKPMKCSWGSKPTVPGTSSGPLPPPATAHMLGVSAANLAAYGGHAHI
MTMMHPQGSGGYQNVATSQQHMYYQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagcaagggctaaatcagcaacagcaagctatgatgcaacaagcattgtac
caccatcccagcttcttcaccagtcctcagatagagcctattttgagtggaaatcttcct
cctaactttgatgcagctacttgccgcagtgtgtatgtcggaaatattcacccgcaggtc
tccgaaccccttctacaagaagttttctcgagtactggtcctatcgaaggatgcaagctt
attaagaaagataagtcatcgtatggtttcgtggactactttgatcgtagatcagcttcc
cttgctattgtgactcttaacggaaggcatcttttcgggcaacctattaaagtgaattgg
gcatatgctagcagtcagagggaggatacatcaggtcatcacaacattttcgtcggtgat
ctcagccccgaagttactgacgctacattgttcgcatgcttttctgtgtactccagttgt
tcggatgctagggtaatgtgggaccaaaaaaccgggcgttcaagaggttttggttttgtt
tcttttaggaaccaacaggatgcccaaagtgcaataaatgacttaaatgggaagtggctt
ggaagtagacagatccgatgtaactgggctgcaaaaggtgctaattccaatgatggcaac
gccaaaagtgttgtagagcttactaatggagcttctgaaggtcaagaaaaatctaatgat
gatgctccggagaacaatcctctgtatactaccgtttatgtgggcaatctcgctcccgag
gttacatcggctgatctccacagtcatttccactcccttggagtgggaaccatcgaggat
gtccgtctgcaacgagataaaggtttcggctttgtgagatacagttcgcatgaagcagca
gctcttgccatacagatgggaaatgcccaaattcttttcggtaaaccaatgaagtgctca
tggggtagcaaacctacggtgccaggaacgagctcgggccctcttcctccaccggccact
gcacatatgttgggtgtatcagccgcaaaccttgctgcttacggcggtcatgcccacata
atgaccatgatgcatccacagggcagcggcggataccaaaatgtcgcgacgagccagcag
catatgtactaccagtaa
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