Hibiscus syriacus (Rose-of-Sharon): 120212104
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Entry
120212104 CDS
T09559
Name
(RefSeq) tRNA (cytosine(72)-C(5))-methyltransferase NSUN6-like
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120212104
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120212104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
Methyltransf_25
RsmF-B_ferredox
Ubie_methyltran
NSUN5_fdxn-like
Zwilch
Motif
Other DBs
NCBI-GeneID:
120212104
NCBI-ProteinID:
XP_039066455
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSAASERYSYNPILRWNPQVEDYFINAYGSSHFAQISKALTRPSCYSCIRVNTLKSTSDD
VIEKLWEIMRKSGSQNDVEDINLRETKACNDIDSDMAETQSSLQHESISKCQIPGLGYVV
FVKGSGPHDIDYGYLPNKPPKEVLVSRKCAEAVLRGAQVYVPGVMACSSHVEEGDLVAVS
VAVEQPSPDGGWGLGITRGTVLQGLPTDPFYFERNGLYIGQGTTMLSRAGIFRASQGIAV
DMNNRVFKLPSFYDVLEGEIFLQNLPSIVAAHALDPQKGERILDMCAAPGGKTTAIAILM
KDEGEVIAADRSHNKVMDIQKLAAELGLTCITTYKLDALKAVRKKNGSSDMTTLCHNKDN
NDVVVQRSDSKSLGNGVSSATIVGSNVNTTCEENVSNEKANERTYASKADIRKTMRRMRN
GPGRNQSLGGRVENSKGFLPNRFDRVLLDAPCSALGLRPRLFAGEETIETLRNHAKYQRR
MFDQAVRLVRPGGVLVYSTCTINPGENEALVRYALDTYKFLSLAPQHPRIGGAGLVGSCE
FPDGYVEEWLRPGEEELVQRFDPSSPLDTIGFFIAKFAVGSKDDI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagcatcagagcgttacagttacaaccccatattgcgatggaaccctcaagtc
gaagattacttcatcaatgcatatgggtcttcccatttcgctcaaatctccaaagcctta
acgcggccgtcttgctattcttgtattcgagtgaacactctcaagtccacaagtgatgat
gtcattgagaaactttgggaaatcatgagaaaatcggggtctcaaaatgatgttgaagac
ataaatttgagggagaccaaagcatgtaatgatattgactcagatatggctgagactcaa
tctagcttacaacatgagtccatcagtaaatgtcagataccgggtttagggtatgttgta
tttgttaagggttctggaccacatgatattgattatggttatttgcccaacaaaccaccc
aaggaggtccttgttagtaggaaatgtgctgaagctgttcttcgaggtgctcaggtatat
gttcctggggttatggcctgcagttctcatgttgaggaaggggatctagttgcagtttct
gttgcagtggagcagccttctcctgatggcggatggggacttggtataacacgtgggact
gttctgcagggactgccgacagatcccttttactttgaacgaaatggattatacatcggt
caaggaacaacaatgttgtcaagagctgggatctttcgtgcttctcaaggaattgctgtt
gatatgaataatcgagtatttaagttgccttcattttatgatgtgctcgagggggaaata
tttcttcaaaacctgcccagcattgttgctgctcatgctcttgatcctcagaaaggtgag
cggatactagacatgtgtgcagcaccaggaggaaagacaactgcaattgctatacttatg
aaggatgaaggggaggtcattgcagcagatagatctcataataaggtgatggatattcag
aaattggcagctgagttgggtttgacttgtattacaacatataaactagatgctctcaaa
gctgttcgtaagaaaaatgggtctagtgatatgaccactttgtgccataacaaggataac
aatgatgtagtggttcagaggtctgactcaaagtctcttgggaatggagtgtcatctgct
actattgtaggatcaaatgttaatacaacttgcgaggagaatgttagcaatgaaaaagcg
aatgagagaacttatgctagcaaagctgacattaggaagaccatgcgaagaatgaggaat
ggtccagggagaaatcaaagcctgggtggcagagtggagaattctaaaggcttccttcct
aatagatttgatcgtgtccttcttgacgctccttgctctgctcttggtttgagacctcgg
ctatttgctggagaggaaaccattgagacattaagaaaccatgcaaaatatcaaaggaga
atgtttgatcaggctgttcggttagttcgccctggtggtgtccttgtgtactcaacgtgt
acaatcaatcctggtgagaatgaagcattggtccggtatgctctggatacatataagttc
ctgtctttagctccgcagcatccaagaattggaggagctggtcttgtcggcagttgtgaa
tttccagatggatatgttgaagagtggttaagaccgggagaggaggaattggttcaaagg
tttgatccctcatccccacttgatacaattggctttttcatagccaaatttgctgtaggc
tccaaagatgacatataa
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