Hibiscus syriacus (Rose-of-Sharon): 120213175
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Entry
120213175 CDS
T09559
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120213175
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120213175
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120213175
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120213175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
Tex_central_region
HTH_44
HHH_9
OB_PDCD11
Motif
Other DBs
NCBI-GeneID:
120213175
NCBI-ProteinID:
XP_039067246
LinkDB
All DBs
Position
Unknown
AA seq
1602 aa
AA seq
DB search
MGRNVISDEEDELEVDEEGEPIEGEGLNDRDPDEDEEDEEGQDEYENDGFIVDDVEDEEV
DEDEEREDSDEERRKKKKKRKKKEAEDLDEDDYELLRENDVNVPKGSKKFKRLKKARRDF
DEDQFGLSDDEFDGSMKGGATAEEKLSRTLFGDDDGQPLEDIAEDEEPIEEEEDGDMGEE
DEMADFIVEEDEEHGASVRRKKMKNKKSRHAPDVSSSALKEAIDIFGDVDELLLLRKQGL
DSVEQKEGKLEDQFEPTVLSEKYMTEKDDQIRMTDIPERMQISEESTGPPPVDELSIIEE
STWIYNQLINGAVPLFGKERKDHFIDKDDIMRFLDLTHVQKLDIPFIAMYRKEQCLSLLQ
DPEQHEDDDTDQDKSEKAPTIKWHRVLWAIQDLDRKWLLLQKRKSGLQSHYNKRFEEESR
RIYDETRLNLNQQLFESILKDLKGAESEREVDDVDAKFNLHFPPGEVGVDEGQYKRPKRR
SQYSICNKAGLWEVANKFGYSAEQLGAHLSLEKMEDEFEDAKETPEEIASNFTCAMFETP
QAVLKGARHMAVVEISCEPSVKRCVRNIFMDHAVVSTSPTPDGTIAIDSFHQFASVKWLR
EKPLIRFDDAQWLLIQKAEEEKLLQVTIKLPEKNLNNLIKECNENYLSNGVSKSAQQWNE
QRKLILHDAVFGFLLPSMEKEARSLLASRAKNWLLLEYGKDLWNKVSVGPYQRKENDVNS
DEEIAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTANLTLRSQNVHDQKRKKNDQQRV
LKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDELSIVYGDESLP
RLYENSRISSDQLPGQSGIVRRAVGLGRYLQNPLAMFATLCGPGKEILSWKLNPLENFLT
ADEKYNMVEQVLVDVTNQVGLDANLAASHEWLFAHLQFISGLGPRKAASLQRSLVRVGTI
FTRKDFLSTHGLDRRVFVNGVAFLRVRRSGLAANSSQFIDLLDDTRIHPESYLVAQELAK
DVYDEDLKGDNDDEDALEMAIEHVRDRPGLLRRLKIDNYLKSKSKERQSKRETFYDIKRE
LIQGFQDWRTPYKEPNQDEEFFMISGETEDTLAEGRIVQATVRRLQGGRAICALESGLTG
MIMKEDYADDWRDIVELSDRLHEGDILTCKIKSIQKNRYQVFLVCKDSEMRSNRHQHVQN
LDPYYHEEQSSLQSEQEKARKKKELAKKHFKPRMIVHPRFQNITADEAMEAAFWMNLLSK
PACEFWLLQFFLSDKEPGESIVRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDVTS
LLRIGKTLKLGEDIFEDLDEVMDRYVDPLVSHLKAMLSYRKFRRGTKAEVDELLRIEKSE
YPMRIVYCFGISHEHPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQR
HIDDPQQESAPSIRSVAAMVPIRSPAAGGSAGASTGGSWGGSTNEVGWRGQSFDRGQSST
PGSRTGRNDYRNSSSRDGHPSGVPRPYGGRGRGRGSYNSSRGHNEGQDSSYDETPKRDSG
NKKGEDSWGNFPGAKVQNSPGREAFPGGWSGSAGTESGSGWQ
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaatgtcatctcagatgaagaagatgagttggaggtcgatgaggaaggagag
cccattgaaggagaaggtctcaatgaccgcgaccctgatgaggatgaagaagacgaagaa
ggtcaagatgagtatgagaatgatggattcatagttgatgatgtggaggatgaagaggta
gatgaagatgaagagagggaagatagtgacgaggagaggcggaagaaaaagaaaaaaaga
aagaagaaggaagctgaggaccttgatgaagatgactatgagctcctccgggagaatgac
gttaatgtaccaaagggaagcaagaaatttaagcggttgaaaaaggctcgtagagatttc
gatgaggatcagtttggactatccgatgatgagtttgatggaagcatgaaagggggtgca
actgctgaggaaaagcttagtcgtactctatttggtgatgatgatggacaaccacttgaa
gatattgctgaagatgaagagcccatagaagaggaagaggatggagacatgggtgaagaa
gatgaaatggcggactttattgtagaagaagatgaggagcatggagcttctgttagacgg
aagaagatgaagaataagaagtcgaggcatgcaccggatgtgtcatcatctgctttaaag
gaagctatagatatctttggtgatgtggatgaactcctcttgctacggaaacagggctta
gattctgttgagcaaaaagaagggaaacttgaagatcaatttgaacctactgttctctct
gaaaagtacatgacggaaaaggatgaccaaattcggatgactgatattccagaaagaatg
cagatttcagaagaaagcactggccctcctccagtagatgaactcagcataattgaagag
agcacctggatatataatcagcttataaatggtgctgtaccattatttggtaaagaaagg
aaggatcattttatagacaaggatgacattatgagatttttggatctcacacatgtgcag
aagttagatattccctttattgcaatgtatcgcaaggagcagtgccttagtcttctacaa
gatcctgagcaacacgaggatgatgatactgatcaggataaatctgagaaagctcctaca
ataaagtggcacagggtactttgggcaattcaggaccttgaccgaaaatggctgcttctt
caaaagagaaagagtggtctccagtcacactataataagcggtttgaagaagaatctcgt
cggatatacgatgaaacaagacttaacttgaaccaacagctttttgagtcaattcttaaa
gatctcaagggtgcagagtcagaaagggaagtcgatgatgttgatgccaagtttaacttg
catttcccacctggggaggttggtgttgatgaaggtcaatataagaggcccaagaggaga
tctcaatatagtatttgcaataaggctggcctgtgggaggttgcgaacaagtttggatac
agcgctgagcaacttggggcgcatctatctctggaaaagatggaagatgaatttgaagat
gcgaaagagacacccgaggagatagcttcaaactttacatgtgctatgtttgagactcca
caagctgtccttaaaggagccaggcatatggctgtggttgagattagctgtgagccgtct
gtcaagagatgtgttcgcaatatctttatggatcatgctgtagtgtcaaccagccctact
cctgatggaacaatagccattgattctttccatcagtttgccagtgtgaagtggttgcgt
gaaaaacctttgatcagatttgatgatgctcaatggctccttatccagaaggctgaagag
gagaagcttcttcaagtaactattaagctgcctgaaaaaaatctaaacaatttgattaaa
gaatgtaacgaaaattatcttagtaatggcgttagcaaatctgctcaacaatggaatgag
cagagaaagctgatactacatgatgctgtttttggttttcttttgccctcaatggagaaa
gaagcaagatccttgttggcgagtcgagctaagaactggttacttttggagtatggcaag
gacttgtggaataaagtttctgtggggccttatcaaaggaaagaaaatgatgttaattcc
gatgaggaaattgctccacgagtcatggcttgctgttggggccctgggaagccagcaacc
acttttgtgatgttggattcatctggggaggtgcttgatgtgctttatactgctaatctt
acattgcggtctcaaaatgtacatgaccagaaacgcaaaaaaaatgatcagcaacgtgtt
ttgaagttcatgactgatcatcaaccacatgttgttgttcttggagctgtgaatttgtct
tgtactcgattgaaggatgatatctatgagattatttttaagatggtggaggaaaatcct
agagatgttgggcatgaaatggatgagctgagcattgtatatggggatgaatctctaccc
cggctctatgaaaattctaggatttcatcagatcagctccctggacagtcaggcattgtt
aggcgggctgttgggcttgggcgctatctccaaaatccgttagcaatgtttgccactttg
tgtggaccagggaaggagatactctcctggaagcttaatccactggaaaactttctcacg
gctgatgagaagtataacatggttgaacaggttttggttgatgtcacaaaccaggtgggc
ctagatgctaatttggctgcaagtcatgaatggttgtttgcacatttgcaattcatttct
ggtcttgggcctagaaaggcggcatcactgcagagatcactggtaagagttggaacaatt
tttactaggaaggactttctgtctacccatggacttgataggagggtgtttgtcaatggg
gtagcctttctgcgcgtcagacgaagtgggcttgctgccaacagcagccagttcattgat
ttgttggatgacacgagaatacatccagaatcttatcttgttgcccaagagttggccaaa
gatgtttatgacgaggatcttaagggcgacaatgacgatgaggatgcattggagatggca
atagaacatgttagggatcggcctggtttgttgagaaggcttaaaattgataactatctt
aaaagcaaaagcaaggagcgacaaagtaagagggagactttttatgatataaaaagggaa
ttaattcagggtttccaggattggcgtaccccttataaggagccaaatcaggatgaggag
ttcttcatgatttcaggtgaaactgaggatacccttgcagaaggccgaattgtgcaagct
acagtacgcagattgcaaggcggacgagctatatgtgcacttgaatctggattgactggg
atgattatgaaagaagactatgcagatgattggagagatatagtcgagttatctgacagg
ctgcatgaaggtgacatattgacctgtaagattaaatcaattcagaagaataggtatcag
gtgttcctggtttgcaaagatagtgagatgagaagcaatcgacaccagcatgtccagaac
ctggatccctactaccatgaggagcaaagtagcctacaaagtgagcaggagaaagctcgt
aaaaagaaggagctggcaaagaagcattttaagcccaggatgattgtccatccacgcttt
caaaatattactgctgatgaagctatggaggcagccttttggatgaatttattatccaag
cctgcttgtgagttttggttgcttcagttttttttatctgacaaggagcctggagaaagt
attgtccgccccagttctcgtggaccttcttatttgactttaactctcaaagtttatgat
ggtgtttatgctcacaaagatatagttgaaggtggaaaagaacacaaggatgtcaccagc
ctgcttcgcattgggaagacattaaaacttggggaagacattttcgaggacttggatgag
gtaatggatcggtatgttgatccccttgtttctcatctgaaggcaatgctgagttatcgt
aagttcaggaggggaactaaagcagaggttgatgagcttttaaggattgagaaatcagag
tatcctatgaggattgtgtactgttttggtatttctcatgaacatccaggcactttcatt
cttacttatatacggagtacaaatccgcatcacgagtatgtcggcttatatcccaaggga
ttcaagttcagaaaaaggatgtttgaggacattgatcgtctagttgcatatttccagagg
catattgatgatccacagcaggagtcagctccatcaattagatcagttgcagcgatggta
ccaattcggagccctgctgctggaggctctgcaggggcatctactggtggtagttggggt
ggttcaaccaatgaagttggttggagaggccaatctttcgacaggggtcaatcttccacc
ccagggtcaagaacaggccgaaacgattacagaaatagcagtagtcgagacggacatcca
agtggtgtaccccggccctatggtgggcgtggacgtggtaggggttcatacaacagcagc
agaggacataacgagggacaggattcatcatacgatgaaactccgaaacgggattcaggt
aacaagaaaggggaagatagctggggtaatttcccaggtgctaaagttcaaaactctcca
ggtagggaagctttccctggtggctggagtggtagtgctggaaccgaaagtggtagtggt
tggcaatga
DBGET
integrated database retrieval system
