Hibiscus syriacus (Rose-of-Sharon): 120213238
Help
Entry
120213238 CDS
T09559
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120213238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120213238
Transporters [BR:
hsyr02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120213238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
120213238
NCBI-ProteinID:
XP_039067323
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MKNSVSDQSFCIESEDEEEEVEKLEDNRHGEDDANENDFYTYFSSAENLQQNKPSSHHTS
QWPQSYRQSIDLYSSVPSPTIGFLGTPTLSRLGSSFLSSSLTRRFTPETLHAPAKKPLLP
LSLDDEIQPHKCSTHSLVPSRKPSVKFDDKIYEVDHGHGIPLGRQSSYGQAVMNGINVLC
GVGILSTPYAAKEGGWLGLIILLTFAVLSFYTGLLLRQCLDSSPELATYPDIGQKAFGAA
GRITLSIILYVELYASCVDYIILEGDNLSSLFPNAHLSLGGFELSSHRLFCLMTTLSVLP
TVWLRDLSVLSYISAGGVFASFLVVICLFWVGLVDQVGFHNKGTPLNLATLPVAVGLYGF
CYSGHAVFPNIYTSMAEPAKFNSVLLSCFGICTLLYAGTAVMGYKMFGEATESQFTLNMP
KDLIASKIAVWATVVNPFTKYALTLSPVAMSLEELLPSRHLKSHIYPILIRTLLVMSTLL
VGLSVPFFGLVLSLIGSLLTMLVTLILPPACYLSILRGKVGRIQAAICIIIIAVGVVSSA
FGTYSALTKIVENLRK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactcggtttcggatcagagtttctgcatcgagagtgaagatgaagaagaagaa
gtggagaagctagaggataacagacatggagaagatgatgccaatgagaatgatttttat
acctacttttcttcagctgagaatctgcaacaaaacaaacccagttctcatcacaccagt
caatggcctcaaagttacaggcagtctattgatttgtatagtagtgtaccatctcccacc
attggattcttgggcactcctacactatcaagactagggagttcgtttctctcatcgtcg
ttaactcgaaggtttacaccagaaacactacatgcgccggcgaagaaaccattactacca
ctgtcgttagatgacgaaatacaaccgcataaatgtagtacgcactctttggtgccatcg
aggaaaccatcggtaaaattcgatgacaaaatctacgaggtcgaccatggccatggaatc
cccctcggtcgccagagttcgtatggtcaagcagtgatgaatgggatcaatgtgctatgt
ggtgttggaatcctttccaccccatatgctgctaaggaaggaggctggttagggcttata
atattattaacatttgctgtgctttctttttacactggcctgcttctgcgccaatgtctg
gatagctcacctgagcttgctacttaccctgatatcggtcaaaaggcgttcggtgccgcc
ggtagaattaccctttcgataattttgtatgtggagttatatgcttcttgtgttgactat
ataattctagagggtgataatttatcatccttattcccaaatgcacatcttagtttgggc
ggattcgagttgagctcacatcgtctcttctgtttgatgacgactctttccgttcttccg
acggtttggctcagagacctcagtgttcttagttatatatcagctggtggagtttttgca
tcatttttggtggtcatttgcttgttttgggttggcttggtagaccaagttgggtttcat
aacaaagggacaccattgaatttggctactcttccggtcgcagttggactctacggcttc
tgctactcgggccacgctgttttcccaaatatatacacttcaatggctgaaccagctaaa
ttcaattcagtactcttatcatgtttcggaatctgtactttgttgtatgctggaactgca
gttatggggtacaaaatgttcggcgaagcaacagaatctcaatttacacttaacatgcct
aaagatctgattgcttctaagattgccgtatgggcgacggttgtcaatccatttaccaaa
tatgcattaaccttgtctccagtagcaatgagtcttgaggaattgttaccatcacgccat
ctcaagtcccacatctaccctatcttgattcgaacattgctggtgatgtcgaccttgctc
gtcggtcttagcgttcccttctttggcttggtgttgtctttgataggatccttactcaca
atgcttgttaccttgatactcccccctgcttgttatttaagcatactgagaggcaaagta
ggccgtattcaggctgcaatttgtattataattattgcagtgggagtagtttcatcagcc
tttggaacatactcagcgctaaccaagattgttgagaatttgagaaaatga
DBGET
integrated database retrieval system
