KEGG   Hibiscus syriacus (Rose-of-Sharon): 120214314
Entry
120214314         CDS       T09559                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5D-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsyr01009]
    120214314
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsyr03036]
    120214314
Enzymes [BR:hsyr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120214314
Protein phosphatases and associated proteins [BR:hsyr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120214314
Chromosome and associated proteins [BR:hsyr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120214314
SSDB
Motif
Pfam: JmjC PLU-1 JmjN zf-C5HC2 PHD ARID KDM5_C-hel PHDvar_NSD BT_3657-like_N PHD-1st_NSD
Other DBs
NCBI-GeneID: 120214314
NCBI-ProteinID: XP_039068167
LinkDB
Position
Unknown
AA seq 1514 aa
MHGVLSRFYVQVEVVAVMGKGRPRAVETGQNLSVSSTGSLNIQSGPVYYPSEEEFRDPLE
YIYKIRPEAEPYGICKIVPPKTWSPPFALNVESFTFPTKTQAIHQLQARPASCDSKTFEL
EYNRFLEGHCGKKLKKSVIFEGEELDLCKLFNAVRRYGGYDKVVKGKKWGEVFRFVRSWE
KKISECAKHVLCQLYREHLYDYETYYKRLSQERAKSYKRGISEDAESEKKVKIYSCKRRR
KNSDHRNDTVCKVEDEDLDQICEQCRSGLHGEVMLLCDRCNKGWHXYCLSPPLKQVPPGN
WYCFECLNSDKDSFGFIPGKQFTLEAFRRLADRAKKKWFGSGCVSRVQIEKKFWEIVEGL
AGEVEVMYGSDLDTSVYGSGFPRINDQRPESVELNAWDEYCRSPWNLNNLPKLKGSMLRA
VHHNITGVMVPWLYIGMLFSAFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSEASAFEKVM
RDCLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSVLQEPGNFVITFPRSYHGGFNLGL
NCAEAVNFAPADWLPHGGSGAELYQLYRKAAVLSHEELLCVVAKQSDWDSKASTYLKTEL
LRIYKNERTWRERLWLSGITRSSPMSPRKSPEFVGTEEDPTCIICKQYLYLSAVVCRCRP
SSFVCLEHWEHLCECKSSKLRLLYRYTLAELADLVLMVDKNASEETPQNDSLQRNISSSK
ELNALKKAKGAHHTQLAEQWLSHSCKILQSPFDGDACTSLLKEAEQFLWAGAEMDSVRDA
VKNLTAARKWAQGLRDCLSKIENWSPGGEFEKVTLKLVNKLLSVDPVPCNEPGYLKLKDF
AEEGNLLVHDIDTALSKCSKIDDLELLYSRACSSPIHVAQTEKLSQKISLVKVWVDNARK
AIFDERPAAVEVDILYKLKSEILELQVQVQEREMIFDIVCLAESYQARCRYLLSGSMTLK
DVEVLLQEMASFSVNIPELRVLKQYQIDTSFWIICFNDIMININQREDQQSVINELNCLI
EDGESLKIRVDELSLVKIELKKACCREKAMKARNTKMALDFLQQLLADAVVLQIETEEVF
LSLSRELAGALQWEERAKDTLACKAQMSEFEDLIRMSNNIVAIMPSLDDVQTAISEANLW
LNNSKQFLESDFSESSTSRSLLKLDDLKELVSQLRYHKMTFKQQDVLETIFEDSKRWQRD
AYSLLQDMECLYGVTDIGDGRSNGLILKIEHLVNLLESITKAGLSLGLDFPEIPKLQNAC
STLHWCNKVLSFCYLMPSYERLLPGFRKAFNPQIDRNLKEGNEINILPEDHFRSKLSELK
DIGLQWTDRANKVAADSGALGLDGVYELISLGESLPVCLRKELEVLRVRSMLHCICRKPY
DEKTMIACSQCEEWYHVRCVKLTFRPKVFICAACMPGSEHLVSSLDSSLVHERYMDAKFV
EPKTPSPRHKKPGMRSKKSESQRSPTVGKNSVFVHLSGIGIDRLRWQNRKPSRRAAKKRA
ELDSLQFFHTLHGR
NT seq 4545 nt   +upstreamnt  +downstreamnt
atgcatggtgttttgtctagattttatgtacaagttgaggtggtggcggtgatggggaag
gggagacctagggcagttgaaacagggcaaaatttgagcgtctcatccactgggtcattg
aatatacagtcagggccggtttattaccccagtgaagaggagttcagggacccattagag
tatatttataagatcaggccagaggccgagccatatgggatttgtaagattgttccacct
aagacttggagccctccatttgccttgaatgtggagtcttttacttttcctactaaaaca
caagcgattcaccagttgcaggcacggcctgcttcttgtgattcaaagacctttgagtta
gagtataataggtttttggaaggacattgtggtaagaagttgaagaagagtgtgattttt
gaaggggaggagttggatttgtgtaaattgtttaatgctgtgaggaggtatgggggttat
gataaggttgtgaaggggaaaaagtggggggaggtttttaggtttgtgaggtcctgggag
aagaagatttcagagtgtgctaagcatgttttatgtcagttgtatagagagcatttgtat
gattatgaaacttattataaacggttgagtcaggagagggcaaagagttacaagagaggc
atcagtgaggatgcagagagtgaaaagaaggttaaaatttatagctgcaagaggagaagg
aagaatagtgaccatcggaatgatacggtttgtaaggtcgaggacgaagatcttgatcag
atatgtgagcaatgtagaagtgggttacacggggaagtgatgctactgtgtgatagatgt
aataaggggtggcatnnatattgtctatcaccacctttgaagcaggttccaccaggtaac
tggtactgctttgagtgcctgaattctgacaaagatagttttggttttattcctggaaaa
cagtttacattggaagcttttaggcgtttggctgatcgagccaagaagaaatggtttgga
tctggatgtgtttcaagggtacagatagagaaaaagttttgggagattgtggagggtttg
gcaggtgaagtggaagttatgtatggaagtgatctggatacttctgtttatgggagcggt
tttccacgtataaatgaccagaggccagaatctgttgagcttaacgcttgggatgaatac
tgtaggagcccatggaatctcaataacttgcccaagttgaaaggttcgatgctgagggct
gttcatcataatattactggtgtcatggttccctggctgtatattggaatgctattctct
gctttctgttggcattttgaagatcattgcttttattcaatgaattaccttcactgggga
gaacctaaatgctggtacagtgtccctggcagtgaagctagtgcttttgagaaggtgatg
cgggattgtctccctgatctatttgatgcgcaacctgacttgctctttcagcttgttaca
atgttaaatccatctgtcttgcaagaaaatggtgtcccagtctatagtgtgctacaggag
ccaggaaattttgtcattacattccctagatcttatcatggaggattcaatttgggttta
aattgtgcagaggctgtgaattttgctcctgctgattggttaccacatggtgggtctggg
gcagagctgtatcagttatatcgtaaagctgcagttttatctcatgaggagcttctttgt
gtggtggccaagcaaagtgattgggatagcaaggcatcaacttatttaaaaacagaattg
ctcagaatatataaaaatgaaaggacatggagggagaggctttggctaagtggcataaca
agatcatctcccatgtctcctcggaaatctcctgaatttgtgggtactgaagaggatcca
acatgcattatatgtaagcagtatttgtatctttctgctgttgtttgccgctgcaggcca
tcttcttttgtctgcctggagcattgggaacacctctgtgagtgtaaatccagtaaactc
cgtcttctctatcgttatacactggcagaattggcagatttagtgcttatggtggataag
aatgcttcagaggagacaccacaaaatgatagtttacaaaggaatatttcatcttccaag
gaactaaatgctttaaaaaaggcgaaaggtgcccatcatactcaacttgcagaacaatgg
ctttcgcactcgtgtaagattttgcagagtccttttgatggtgatgcatgtactagtcta
ttaaaggaagctgaacagtttctctgggctggtgctgagatggattcggtccgggatgca
gtaaagaatctgactgcagctcggaaatgggcacaaggcttaagagactgtctttctaaa
attgaaaactggtctcctggaggtgaatttgagaaagtgactcttaaattggttaacaaa
ttgcttagtgttgatcctgttccctgtaatgagcctggatatctcaagttgaaggatttt
gctgaagagggcaatttgttggttcacgacattgatactgctttatcaaagtgctctaag
attgatgacttggagttattgtattcaagggcttgcagctcaccaatccatgtagcacaa
actgagaagttatcacagaaaatctctttggtaaaggtatgggtggacaatgcaaggaaa
gctatctttgatgaacggcctgcagcagtggaggttgacattctttacaagttaaaatcc
gagatattggagcttcaggtccaagttcaggaaagagaaatgatttttgatattgtatgc
ctggctgaatcatatcaggcccggtgtagatatttgttgagtggttccatgactctaaag
gatgttgaagtgcttcttcaagaaatggcaagtttcagtgttaacataccggagttgaga
gttctgaagcaataccagattgatacttctttttggatcatatgctttaatgatattatg
ataaatatcaatcagagagaggatcaacaaagtgttattaatgaattaaattgccttata
gaagatggagagtctttgaagattcgagtcgatgagttgtcacttgtgaagattgagttg
aagaaggcttgttgcagggaaaaggcaatgaaggcacgcaatacaaaaatggctttggac
tttcttcagcaactgttagcagatgctgttgttttgcagattgagacagaggaggtattt
cttagtttgtctagagaacttgctggtgccctgcagtgggaagaaagagcaaaggataca
cttgcatgcaaagctcagatgtctgaatttgaggatcttataaggatgtcgaacaacata
gttgctattatgccttcattagatgatgtccaaactgcaatatcagaggctaacttatgg
ttaaataatagcaagcaatttttagaatctgatttttctgagtcatccacatctcgttct
ttgctgaaacttgatgatttgaaggagttggtttctcagttgagatatcataagatgaca
tttaagcagcaagatgtgctggaaactatttttgaagatagcaagagatggcagcgtgat
gcgtattctcttctgcaagatatggagtgcctgtatggtgtgaccgacattggggatggt
aggagcaatggtcttattttgaaaatcgaacatcttgttaacttgcttgaatctatcaca
aaagctggtttatctcttggactggattttcctgagattccaaagcttcaaaatgcttgt
tctacactgcattggtgcaataaagtcctttctttctgctatttgatgccttcttatgag
aggttgcttcctgggtttagaaaagccttcaatccacagattgaccggaacctgaaagag
ggaaatgagataaacattttacctgaagatcacttcagatcaaagctttcagaattgaag
gacatcggattgcagtggactgatcgtgccaacaaggttgcagctgattctggggcactt
ggcttagatggagtttatgaacttatcagcctgggagagagtttgccagtttgcttaagg
aaggaacttgaggtattaagagtccgaagtatgcttcattgcatttgccgaaagccgtat
gatgagaaaaccatgattgcttgcagtcaatgtgaggagtggtaccatgtcagatgcgtt
aaattaactttcagaccaaaggtttttatatgtgcagcttgtatgcctgggagtgaacac
ctggtgtcctctttggactcctcattggttcatgagagatacatggacgccaaatttgtg
gagccgaaaaccccgtctccgcgacataaaaaaccaggaatgagatcgaagaaatctgag
tctcaaagatcgccgacagttggaaagaatagtgtatttgttcatctgagtgggattggg
atagatcgtttaaggtggcaaaatcggaagccttctaggagagcagcgaaaaagcgtgct
gagttggatagtctacaatttttccatacactacacggccgataa

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