Hibiscus syriacus (Rose-of-Sharon): 120214399
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Entry
120214399 CDS
T09559
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120214399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120214399
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120214399
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
120214399
Messenger RNA biogenesis [BR:
hsyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
120214399
Transfer RNA biogenesis [BR:
hsyr03016
]
Prokaryotic type
tRNA degradation factors
120214399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
Urease_gamma
S1_RRP5
Ribosomal_L6
KH_PNO1_2nd
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
120214399
NCBI-ProteinID:
XP_039068236
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MAMLSLAIRARAKPNPLLTWRALHFRNFCSGCLGLSVPPVAGTKFLESFREEFEIGSRVI
SLETGEMARFANGAVVLGVEGTQVLSTVSAGKGDVIRDFLPLTVDYQEKQFAQGVIPNTF
MRREGAPKERELLCGRLIDRPIRPLFPAGFYHEIQVMASVLCSDGKQDPDVLAANATSAA
LMLSDIPWGGPIGVVRLGRICGQFVVNPTMDELSLSDLNLVYACMRDKTLMIDVQAREIT
EKDLEAGLRLAHPEAVKYLEPQIRLAAKAGKQKKEYKLSVVSEQIFEKVRNLAEAPIDAI
FTDPSYGKFERGEALERITQDVKSALEEKCDEQSLRTLPKVVDNVRKKVVRKRIISEGCR
IDGRHLNEVRPIYCKAGRLPLLHGSALFNRGDTQVLCTVTLGSPQDAQRLDSLVGPPTKR
FMLHYSFPPFCIDEVGKRTGLNRREVGHGTLAEKALVAVLPPEDDFPYTVRINSEVMGSD
GSTSMASVCAGSMALMDAGIPLQEHVAGVSVGLVTDVNPETGEITDYRILTDILGLEDHL
GDIDFKIAGTRNGVTAIQLDIKPAGIPLDIICECLEPARKGRLQILDHMEKEISVPRSRD
DRNSPRLVTLKFSNDAIRKFIGPLGALKRKIEEETGARISVGDGTITIAAKNQAIMEKVL
DKVDFIVGREIEVGGIYKGIVTSIKEYGAFVEFNGGQQGLLHISELSHEPVSRVSDVVSV
GQQISLMCIGQDVRGNIKLSRKANLPRPESEEKGVTEGSAPVTKEKANIWASLENVSKVE
HLKSTLEELPPNKMEKTETNRSASLQPAVVIRSAAECDEEEKSAGLSKTSKSAPKPKGTV
KRGSKLKTVQSSSDKPGSSTLSSMLSESLSRMEAKKEFDSEDDGEANLNDQNKESDVKSP
VTPQKLKLGTKVTAKIYQIRARGLVLDLGGGIRGMYRFEPNGEREFTIGDELQVQCSSFT
SKGIPVMTLVDEE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgctctcactagcaatcagagctcgagctaaacccaaccctctcctgacatgg
agagccttacatttccgcaacttctgcagcggctgtttaggtctatctgtcccgcctgtg
gcagggaccaagtttcttgagtcgtttagagaagagttcgagattgggtctcgggtaatt
tcactggaaacgggtgaaatggctcgttttgctaacggtgctgttgttttgggcgtggaa
gggacccaagttttgtccacggtttcagccggtaaaggcgacgtcattcgagacttttta
ccgctcactgttgattatcaagagaagcaatttgctcagggtgtgatcccaaatacattc
atgcggagggaaggtgctccaaaagaacgagaacttctgtgtggtcgtctaattgatagg
cccatacgacctctttttccggctgggttttaccatgagatccaggtaatggcaagcgtt
ctttgttctgatggaaaacaagatccagatgtgttggcagctaatgcgacatctgctgct
cttatgttatcagatattccatggggtggacccattggagtggtacggctagggagaatt
tgtgggcagtttgttgttaatccaactatggatgagcttagtttaagtgatctcaacttg
gtatatgcatgtatgagggacaaaacattgatgatagatgtgcaagctcgtgaaatcacc
gagaaggatttggaagctggtttaagactggctcatccagaagcggttaaatatcttgaa
cctcaaatcagactggctgcaaaagctggcaaacaaaagaaggaatacaaactatccgtg
gtctcagaacaaatctttgaaaaagtcagaaacctggcagaagcacccattgatgccatt
tttaccgatccttcctatggcaagttcgagcgtggagaggctttagagagaataacacaa
gatgtcaaaagcgcacttgaagaaaaatgtgatgagcagagcttaagaactttgccaaag
gttgtggacaatgtcaggaaaaaggttgttcgcaaaagaattatttctgaaggatgtaga
attgatgggagacatcttaatgaagttaggccaatatactgtaaggctggccgtttgcct
ctattgcatggatctgctcttttcaatcgtggagatactcaggttctttgtaccgtgaca
cttggatcacctcaggatgcccaacgcttggattccttggttggtcccccaacaaagcgt
ttcatgcttcactatagttttccaccattttgtatcgatgaagttggtaaacgaactggc
ctgaacagacgtgaagtcgggcatggaactcttgcggaaaaagcacttgttgctgtatta
cctcctgaagatgattttccatacacagttcgtattaattctgaagtcatgggttcagat
ggttcaacatctatggcctctgtctgtgcaggcagtatggctttgatggatgctgggatt
ccattacaagaacatgttgcaggcgtttcagtgggccttgttaccgatgttaacccagaa
actggtgaaattacagactatcgtatattgacggatattttgggtcttgaagatcatctg
ggagacatagacttcaagattgccgggacaaggaatggagttactgcaattcaattggac
ataaaacctgctgggatccctttagatataatatgcgagtgtttggagcctgcacgtaaa
ggacgccttcaaatccttgatcacatggagaaagagattagcgtgccacgaagtcgagat
gatagaaattctcctcgactagttacactgaagtttagcaatgatgctattcggaagttt
attgggcctctaggtgctctgaaaagaaaaatcgaagaggaaacaggtgctcggatctcc
gtaggtgatggaacaattactatagctgctaagaatcaggctataatggagaaagtgcta
gataaggttgattttatagttggccgtgaaattgaagttggaggaatctataaaggcatt
gtgacatcaatcaaagaatacggtgcctttgtagagtttaatggtggacagcaaggtctg
ctacacatttctgagttgtcacatgaaccggtgtctcgggtttcagatgtggtgtctgtt
ggccagcaaatctctttgatgtgcatagggcaggatgttcgtggtaatataaaattatct
cgtaaagcaaatttgcctcggcctgaatctgaggaaaaaggtgtaactgaaggatctgct
cctgttactaaagaaaaagctaatatttgggcatcacttgagaatgtgtcaaaagtagaa
cacctgaagtctactcttgaggagttgcccccgaacaaaatggagaaaactgaaacaaac
cggtctgcctctttacaaccagcagtagtgattcggagtgctgcggagtgtgacgaggaa
gagaaatctgctggtttgagtaagacttccaaaagtgctcctaaaccaaagggcacggtg
aaaaggggtagtaaactgaaaacagtccagtcttccagcgacaagcctggttcttcgacc
ctcagcagtatgctatcggaatccttatctcgaatggaagcgaagaaagaatttgattct
gaagatgatggtgaggctaatttgaatgatcagaacaaggaaagtgatgttaagtctccc
gtgacacctcaaaagctgaagttgggaactaaagttactgccaagatttatcaaattcgt
gcacgtggtttagttctcgatttgggtggtgggattcgtggcatgtataggtttgagccc
aatggtgaaagggagtttaccataggtgatgaattacaagtccaatgttcaagttttacg
agtaaaggtatcccggtcatgactttggtggatgaagaatga
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