Hibiscus syriacus (Rose-of-Sharon): 120214487
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Entry
120214487 CDS
T09559
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120214487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsyr03019
]
120214487
03016 Transfer RNA biogenesis [BR:
hsyr03016
]
120214487
03012 Translation factors [BR:
hsyr03012
]
120214487
04131 Membrane trafficking [BR:
hsyr04131
]
120214487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsyr04147
]
120214487
Messenger RNA biogenesis [BR:
hsyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120214487
Transfer RNA biogenesis [BR:
hsyr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120214487
Translation factors [BR:
hsyr03012
]
Eukaryotic type
Elongation factors
120214487
Membrane trafficking [BR:
hsyr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120214487
Exosome [BR:
hsyr04147
]
Exosomal proteins
Proteins found in most exosomes
120214487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
SRPRB
Semialdhyde_dhC
AAA_22
Motif
Other DBs
NCBI-GeneID:
120214487
NCBI-ProteinID:
XP_039068306
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHESLPEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagattcacatcaacattgtggttattggccatgtcgactctgggaag
tcaacaaccactggccatttgatctacaagcttggtggtatcgacaagcgtgtgattgag
aggttcgaaaaggaggctgctgagatgaacaaaaggtcattcaagtatgcctgggtgctg
gacaagcttaaggccgagcgcgaacgtggtattaccattgatattgccctgtggaagttt
gagaccaccaagtactactgcactgtgatcgatgcccctggacatcgtgactttatcaag
aacatgattactggtacctcccaggctgactgtgctgttctcatcatcgactcaaccact
ggtggtttcgaagctggtatctctaaggacggtcagacccgtgagcatgctttgcttgcg
ttcacccttggtgtcaagcagatgatttgctgctgcaacaagatggatgccacaactcca
aagtattccaaggcaaggtatgatgaaattgtgaaggaagtctcttcatatcttaagaaa
gttgggtacaaccctgagaagatcccatttgtccctatctctggtttcgagggtgataac
atgattgagagatctaccaacctcgactggtacaagggtcccactttgctcgatgctctt
gaccagatcaatgagcccaagaggccttcagacaagccactcaggctcccacttcaggac
gtctacaagattggtggtattggaactgtccctgttggtcgtgtcgagactggtgtcctt
aaacctggtatggtcgtgacctttggccccactggtctgaccactgaagttaagtctgtt
gagatgcaccatgaatccctcccggaggctctacctggtgacaacgttgggttcaatgtt
aagaatgttgctgttaaggatctcaagcgtggttatgttgcttcgaactcaaaggatgat
cctgccaaggaggcagccaacttcacctcacaagtcattatcatgaaccaccctggtcag
attggaaatggatatgccccagttctcgactgtcacacctcccacattgccgtcaaattt
gctgaattgttgaccaagattgacaggcgatctgggaaggagcttgagaaggagcccaag
ttcttgaagaacggtgatgcagggatggtgaagatggttccgaccaagcctatggttgtc
gagacattctcggagtacccacctcttggacgtttcgctgtgagggacatgcgccagacc
gttgctgttggtgtcatcaagagcgtcgagaagaaggacccaaccggtgccaaggtcacc
aaatctgccgccaagaagaagtga
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