Hibiscus syriacus (Rose-of-Sharon): 120214804
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Entry
120214804 CDS
T09559
Name
(RefSeq) squalene synthase 2-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00100
Steroid biosynthesis
hsyr00909
Sesquiterpenoid and triterpenoid biosynthesis
hsyr01100
Metabolic pathways
hsyr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120214804
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
120214804
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hsyr01006
]
120214804
Enzymes [BR:
hsyr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120214804
Prenyltransferases [BR:
hsyr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120214804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
120214804
NCBI-ProteinID:
XP_039068541
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MGSVGALVKHPDDFYPLLKLKMASRHAEKQIPSEPHWAFCFSMLHKVSRSFALVIQQLDT
ELRNAVCIFYLVLRALDTVEDDTSVATYVKVPILKDFYRHIYNSDWHFSCGTKNYKVLMD
QFHHVSTAFLELDKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHACGAEDLAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSVKAVQCLNDMITNTLIHVDDCMKYMSALRTPSIFRFCAIPQVMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTNSMADVYGAFYDFSCMLKAKVDHNEPNAQKALGRL
DSILKTCRDSGVLNERKSYIIPSQSNYTPLLAVVVFIILAIVLANRSSNWPNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgtgggagcgcttgtgaaacacccagatgatttctatccattgttgaagctg
aaaatggcttcgaggcatgccgagaaacagatcccgtcggagcctcactgggccttttgt
ttctccatgcttcacaaagtctctcgtagtttcgccctcgttattcaacagctcgacacc
gagcttagaaacgccgtctgcatattctatttggttcttcgagcacttgatactgttgag
gatgacactagtgtagcaacatatgtcaaagttcctattctcaaagacttttatcgtcat
atatacaatagcgactggcacttttcatgtggtacaaagaactacaaagttcttatggac
cagtttcatcatgtatctactgcttttctggagctcgataaaggttatcaggaggctatc
gaggacattacgaaaagaatgggtgcagggatggcaaaattcatttgcaaggaggttgaa
acggttgatgactatgatgagtattgtcactatgtagcaggacttgttgggttaggtctt
tccaaacttttccatgcctgcggagcggaagatttggctccagattctctctccaattca
atgggtttatttcttcagaaaacgaatattatccgagattatttagaggatattaatgag
ataccaaagtcgcgaatgttttggcctcgcgagatttggagtaaatatgtcaacaaactc
gaggacttgaaatacgaggaaaactcagtcaaggcagtgcagtgcttgaatgacatgatc
actaatactttaatccatgtggatgattgcatgaagtacatgtctgctttacgcactccg
tcaatctttcggttttgtgctattcctcaggtcatggctattggaacactagccttgtgc
tataacaacattgaagtcttcagaggtgtagtgaaaatgaggcgcggtctcactgcaaaa
gtcatcgaccggacaaactcgatggctgatgtctatggtgctttctacgatttttcttgt
atgttgaaagctaaggttgaccataacgaacccaacgcacaaaaagcattgggcagacta
gattcaatcctcaagacttgcagggactctggggtcctgaatgaaaggaaatcttacatt
attccgagtcagtccaattacactccacttctggctgttgtagttttcattatattggcc
attgttttggctaatcggagttcaaattggcctaacaactag
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