Hibiscus syriacus (Rose-of-Sharon): 120214871
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Entry
120214871 CDS
T09559
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120214871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsyr04121
]
120214871
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120214871
Ubiquitin system [BR:
hsyr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
120214871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120214871
NCBI-ProteinID:
XP_039068596
LinkDB
All DBs
Position
Unknown
AA seq
1113 aa
AA seq
DB search
MEIAPASPPPPGFENPSSSTDAVVEDSMKPSPSISSTSSEKEEKAMPSTAPSMSFGAAAA
KFGADMEEEEEEEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCE
VCKHAFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFW
IWRLAFVRSFGEAQSLFLSHISTTIILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREL
GGDAEREDEGDGNGDRAVRRPPGQANRNLAGDGNGEDAGGAQGIGGAGQLIRRNAENVAA
RWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIPWC
CNFVPFSIGRIILYYLSWLFSSASGPVLSVVMPLTDTALSLANITLKNTLTAVTNLTSEG
QGQAVEMLKANSTGVTEVSSNTSASFSEDLLKGVTLGSSRLSDVTTLAIGYMFIFSLVFF
YLGVVTLIRYTRGEPLTMGRFYGIASLAETIPSLFRQFLVAMRHLMTMIKVAFLLVIELG
VFPLMCGWWLDVCTIRMFGKSMSQRVQFFTVSPLASSLIHWVVGIVYMLQISIFVSLLRG
VLRDGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMR
MAPSIFPLDISVSDPFTEIPADMLLFQICIPYAVEHFKLRTTIKSLLRYWFTAVGWSLGL
TDFLLPRPEENGGQENVNVEPGQQDRLQIMQLGGQDQAMAAFAAADDPNRGLLESGNSNA
EFDGDEQTDSDRYSFVLRIVLLLVIAWMTLLVFNSALIVVPISLGRALFNAIPLLPITHG
IKCNDLYAFVIGSYFIWTALAGARYYIEHIRTKRASVLLGKIWKWGVIIIKSSLLLSIWI
FVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDE
SWRIKFERVREDGFSRLQGLWVLREIVFPIIMKLLTALCLPYVLARGVFPVLGYPLVVNS
AVYRFAWLGCLCFGLLCFCAKRFHVWFTNLHNSIRDDRYLIGRLLHNFGEDSEQKRSEAG
TSSETVASNPQGSGIIRRPEPDADVGLRLRRVN
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgctcccgcatctcctccgccgccgggatttgaaaatcccagttcatccaca
gatgccgttgtagaagacagcatgaagccgtctccatcaatatcgtctacatcatcagag
aaggaagaaaaagctatgccatcaacggcgccatcgatgtcgtttggggcggcggcggcg
aagtttggtgcggatatggaggaggaggaggaagaggaagacgtttgcaggatctgccgg
aacccgggcgatgcagagaatccccttcgatacccttgcgcgtgtagcggcagcatcaaa
tttgtccaccaggattgccttcttcaatggctgaatcacagtaatgctcgccaatgcgag
gtttgcaagcatgcattttctttctctcctgtgtatgctgagaatgctccagcaaggctt
ccttttcaggagtttgtggttgggatggcaatgaaagcttgtcatgttctgcagttcttt
ttgcgccttagttttgtactttcagtttggctcctcattatacctttcattaccttttgg
atatggcggttggcttttgtccgaagttttggtgaagctcagagtttattcctaagccat
atttcaaccacaatcattcttactgattgcttgcatgggttcctactttctgctagcatt
gtgtttatttttcttggagccacttctttgagggattatttccggcatttgcgagagctt
ggtggagatgctgagagagaagatgaaggggatgggaatggtgatcgtgctgttaggcga
cccccgggacaagctaataggaatttagctggtgatggtaatggtgaagatgctggtgga
gcacaaggtataggtggagctggccaattgatcagaaggaatgctgaaaatgtggctgct
cgttgggaaatgcaggcagctcgtcttgaagctcatgttgaacagatgtttgatggcctg
gatgatgcagatggcgccgaggatgtaccttttgacgagcttgttggcatgcagggtcct
gttttccatttggttgagaatgcattcactgttttagcgagcaatatgattccttggtgt
tgtaattttgtgcctttctctataggccgcattattctctattatttatcctggcttttc
tcttctgcaagtggtccggtgctatcagtagtcatgccactgacagatactgccctttcc
ttggcaaatatcacattaaagaacacattaactgctgttacaaatttgacatctgaaggc
caaggtcaggctgtagaaatgttgaaagcaaactctactggagtcactgaagtctcaagc
aacacaagtgcatcattttcggaagatcttttgaaaggagtaactcttggatcatcaagg
ctttctgatgttacaactcttgctattggttacatgtttatattctccttagtcttcttc
taccttggcgttgtcactttgattaggtacactaggggtgagcctttgacaatggggagg
ttctatggaattgcctcactagccgagacaataccatccctcttcaggcagttcttggtg
gcaatgaggcacttgatgacaatgattaaagttgctttcttgcttgtaattgagcttggg
gtgttccctttgatgtgtggatggtggctagatgtatgtacaataaggatgtttgggaaa
tcaatgtctcaaagggttcagttcttcacagtttcacctttagcaagctcattgatacat
tgggttgtgggaattgtgtacatgctacaaataagcatctttgtcagccttcttcgaggg
gttttacgtgatggggttctatacttccttcgagatccagctgatccaaactacaatccc
ttccgtgatttaattgatgatcctgtgcacaagcacgctaggagggtcttgttatcagtt
gcagtttatgggagtttgattgtgatgctggtatttttgccagtcaagcttgctatgagg
atggctccctctattttcccactcgatatatcggtatcagacccatttactgagattcca
gctgacatgcttctctttcaaatatgcattccatatgccgttgagcattttaaattgcgg
acaacaatcaaatctcttctgcgctattggtttactgcagttggttggtcattaggctta
actgacttcttacttcccagaccggaggagaatggtggccaggaaaatgtcaatgtggaa
ccaggacaacaggatagactacagatcatgcaactaggtggacaggatcaggccatggct
gcatttgctgctgctgatgatcccaatagaggcctcctggaatcagggaactctaatgct
gaatttgatggggatgagcaaaccgattcagacaggtacagttttgttcttcgcatcgtc
ctgttgctggtcattgcttggatgactttgcttgtattcaattctgccttgatagtagta
ccgatatcacttggacgtgctctattcaatgcaattcctcttctcccaataactcacggt
attaagtgcaatgacctttatgctttcgtcattggaagctatttcatttggacagccttg
gctggggctagatactacattgagcacataagaacaaagagggcttcagttctgttaggc
aaaatctggaagtggggtgtcattatcatcaagagctcgttgctcttatcaatatggatt
tttgtcattcctgttcttattggcctactttttgagcttttggtaattgtgccaatgcgg
gtgcctgtggacgagagtccagttttcctcctctaccaagattgggcgttgggtctcatc
tttctgaagatatggactagattggttatgctggaccatatgatgccattggtagatgaa
agctggcgaataaaattcgaaagggtgagagaagatggcttctccagactgcagggcctt
tgggtattgcgggaaattgtgttccctattataatgaagctgctgacagcgttgtgttta
ccttacgtattagcccgaggggtgtttcctgtgctcggctacccattagtggttaactcg
gcagtctaccgattcgcatggctaggatgcctttgcttcggcctgttgtgcttctgtgcc
aagaggttccatgtctggttcactaacctccacaactccataagggacgacagatacctc
atcggtcgtctacttcacaacttcggggaggactcggaacagaagcgaagtgaggcagga
acttcatctgaaacagtggcttctaatccacagggcagtggaataatccggcggcctgag
cctgatgctgatgtcgggttgagactgaggcgtgttaattaa
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