Hibiscus syriacus (Rose-of-Sharon): 120215258
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Entry
120215258 CDS
T09559
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120215258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsyr03041
]
120215258
Spliceosome [BR:
hsyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120215258
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
120215258
NCBI-ProteinID:
XP_039068917
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MATLSDSFLADLDELSDNEADVLEETNDDVTNMEEDIDGDLADIENLNYDDLDSVSKLQK
SQRYIDIMQKVEEALEKGSGVSNRGMVLEDDPEYQLIVECNGLSVDIENEIIIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEVDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALTLDAAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQTTPPALRSRACRLLASK
ATLAARIDSTRGDPSGNAGKTLKEEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIERT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttatctgattcattccttgcggatcttgatgaattatcagacaacgaagct
gatgttctcgaagaaacaaatgacgatgtcacgaacatggaagaagatattgatggtgac
ctggcggatatcgaaaaccttaactacgatgatctggacagtgtttccaaattacaaaaa
agtcagagatacattgatataatgcagaaagtggaagaggcgcttgagaagggttctggt
gtatcgaatcggggaatggtgctggaagatgatcctgagtatcagctgatcgtggaatgt
aatgggctctcggttgatattgaaaatgagattattatcatccataatttcattcgtgac
aagtaccgtttgaagtttcctgagcttgaatctcttgtacatcatccgatcgattatgct
cgtgtggtgaaaaagattgggaatgaggtggatttaaccctggttgatttggaagggctt
ttgccgtcagccatcattatggttgtttcagttacagcatcgactactagtggcaagcca
cttcctgaagacgttcttcaaaaaactattgatgcatgtgatcgtgcgcttactctggat
gcagcaaagaaaaaggttcttgattttgtagaaagcagaatgggatatattgcaccaaat
ctttctaccattgtcgggagtgctgttgctgctaaacttatgggtactgctggtggtctt
tcagcattagctaagatgcctgcttgtaatgttcagctgcttggtgcaaagaaaaagacc
cttgcagggttttccactgcaacctcccaatttcgtgttggttatattgaacagactgag
atttttcaaactacaccccctgctttgaggagtcgtgcttgccgtctcttggcttcaaaa
gcaacacttgcagcacgtatagattctactagaggagacccatcaggtaatgctggaaaa
actttaaaggaagagattcataagaaaattgaaaaatggcaagaaccacctcctgcaaag
cagcctaaaccgcttcctgttcctgattccgaacctaagaaaaagaggggtggtcgtcgc
ttaaggaagatgaaagagaggtatgctataacagacatgaggaagctggcaaacaggatg
caatttggtgtaccggaggaaagctctttaggtgatgggctaggtgaaggttatggaatg
cttggtcaggcagggagtggcaaactacgtgtttcagttggtcagagcaaacttgcagcc
aaagttgctaagaagttcaaggaaaagagttacggaagcagtggtgctacctctgggctg
acttcaagtttggcattcacgcctgtgcaggggattgagctgacaaatcctcaagctcat
gcacatcagcttggcagtggaactcagagtacttacttctcggagactggaactttttca
aagatagagaggacatga
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