Hibiscus syriacus (Rose-of-Sharon): 120215725
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Entry
120215725 CDS
T09559
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120215725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsyr03000
]
120215725
Transcription factors [BR:
hsyr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120215725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
120215725
NCBI-ProteinID:
XP_039069250
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MDDSLCGFFEEPEFVGDDDLFSIFESLDGLTESFQVPLTPFEETAAAGGAQKSGSSGAHM
ESETEGTSRERKRRKVVSLEETTANVDGPQRVSYITVERNRRKQMNEHLSVLRSLMPCFY
VKRGDQASIIGGVVDYISELQQVLHSLESKKQRKVYSEVLSPRPSQLSPRLNLLISPRTP
QPSSPYKLQKAAGYLSPTVAAAQATIPLEPSPTSSTSSVDNNELVANSKSPVADVEVKFS
GPNLVLKTVSSRIPGQALKIISALEELSLEILKANINTVDETMLNSFTIKIGIECRLSAE
ELAHQIQQTFGHC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtttgtgtgggtttttcgaagaaccggagttcgtcggcgacgatgatttg
ttcagtatttttgagagcttagacggactcactgagtcgtttcaagtacctctcactccg
tttgaagaaacggctgctgccggtggtgcacagaaatctggttcatccggtgcacatatg
gagtccgaaacggagggaacttcgcgggaaagaaagcggcggaaggtggtttctttagag
gaaacgacggcgaacgtcgatggacctcaaagggtgtcgtatatcaccgtggaacgcaac
cgaaggaagcaaatgaacgagcatttatcggtgctgagatcgttgatgccttgcttctat
gtcaaaagaggggatcaagcatcgattattgggggagtagtggattacatcagtgagttg
caacaagttctacactcgctcgagtcgaagaaacaaaggaaagtttacagtgaagtgttg
agtccgagaccgtctcaactcagtccgaggctgaacttgctgataagcccgagaacacct
cagcccagtagcccttacaagttgcaaaaggccgctggttatctgtctcccaccgtggcg
gcggcgcaggctacaattccgctcgaaccgtcaccgacttcctccacttcctccgtcgac
aacaatgagctcgtggcgaactcgaaatctccggtcgccgacgtggaagtgaagttttct
ggcccgaatctcgttttgaagacagtgtcgtctcggattcccggtcaagctctgaagata
atctctgctcttgaggagctctcactcgaaatactcaaggccaacattaacaccgtcgat
gaaaccatgcttaattccttcacgatcaagattggaattgaatgccggttaagtgcagaa
gaactcgcccaccagatccagcaaacgttcggtcattgctag
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