Hibiscus syriacus (Rose-of-Sharon): 120215938
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Entry
120215938 CDS
T09559
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120215938
Enzymes [BR:
hsyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120215938
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120215938
NCBI-ProteinID:
XP_039069398
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MHIPSLSLLLTSLLLPSLISSSSVQDPELVVQDVHRAINASRRNLGYLSCGTGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSSDNDVVNPKPGTLRHAVIQDEP
LWIIFARDMTIRLKEELLMNSFKTIDGRGSSVHIAGGPCITIQYVTNIIIHGLNIHDCKQ
GGNAMVRDSPRHFGWRTISDGDGVSIFGGSHVWVDHNSLSNCNDGLVDAIHGSTAITISN
NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAIGGSANPTINSQGNRFTAPNARFSKEVTKHEDAPESEWKNWNWRSEGDLMVNGAFFT
PSGAGASSSYARASSLGARPSSLVATITTNAGALSCKKGSRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcccttcactttctctcctcctcacttctctccttctcccctctctaatttcc
tcttcctctgttcaagaccctgaactcgtagtccaagacgtgcacagggccatcaatgct
tcaaggaggaaccttggatatctgtcttgtggcaccggcaaccccatcgacgactgctgg
cggtgtgacccgaactgggagaagaatcggcagaggctagccgactgtgccatcggtttc
ggtaagaacgccattggtggaagagacggtaagatttatgtcgtgacggattcgagtgat
aacgacgtcgtgaaccctaagcctggaactctacggcatgccgtgattcaagacgaaccg
ttgtggatcattttcgctcgtgacatgacgatacggctgaaggaagaattgctgatgaac
tcgtttaagacgattgacggccggggttcgagcgtccacattgcagggggtccttgtata
acaattcagtatgtgaccaacatcattattcatggactcaacatccatgactgcaagcag
ggagggaatgcaatggtgagggactccccacgacatttcggatggcgaacgatatcggac
ggcgacggcgtgtcgatcttcggcgggagccatgtttgggtggatcataactccttgtcc
aactgcaacgatggcctggttgatgccattcatgggtccaccgcaatcaccatctcaaac
aactacatgactcaccatgataaagtcatgcttttggggcacagtgattcctatactcaa
gacaagaacatgcaggtcacaattgcctttaatcactttggagaagggctagtccaaaga
atgcctagatgtagacatggatatttccatgtggttaacaatgattacacccactgggaa
atgtatgccattggaggaagtgcaaacccaaccattaacagccaagggaacagatttaca
gcaccaaatgccagattcagcaaagaggtgactaaacatgaagacgcaccagagagtgaa
tggaagaactggaactggagatcggaaggagacctgatggtgaacggtgcgtttttcacg
ccgtcgggcgccggtgcctcgtcgagctatgccagggcttcgagcttgggggccaggcca
tcttcgttggtggcgacgataacgaccaatgccggtgctcttagttgcaagaaaggctct
cgttgctga
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